Transcript Information: S_Transcript_32430.p1


Annotated TAIR IDAT5G58510.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23648287-23654421 | Reverse length=963
E-Value8.4E-201
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3567925398436
Replicate 26.1889195546776
Replicate 36.4766781963822
Condition 2: 8 Hour
Replicate 19.1785941193656
Replicate 27.5690622806784
Replicate 37.2574299126168
Condition 3: 24 Hour
Replicate 17.6714366005513
Replicate 26.3089839505892
Replicate 34.8607794356755


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_32430.p1 GENE.S_Transcript_32430~~S_Transcript_32430.p1 ORF type:3prime_partial len:467 (+),score=119.33,Rab3-GTPase_cat|PF13890.2|1.9e-57,Rab3-GTPase_cat|PF13890.2|8.5e+03,Rab3-GTPase_cat|PF13890.2|4.8e+03 S_Transcript_32430:1513-2910(+)
ATGCTTTGGATTGAATTTGTTCGAGAAGTTCGTTGGTGCTGGGAAGAGTCTCAGCCATTACCCAAAATTCCAGCCAATGGTGTCATTGATCTGTCTTCTTGTTTGATTCATCAGAAATTACAGATGCTTGCAATTTGTATTGAGAAGAAGCGTGAAGTGAATGCAGAGTTCTTTGATGCTGAAGGCAAAGACGAAGTGTCAGTTTATAGTGAGGAGGAAGATCAACTTCAGGAAGACTTGTTGCACAGGTCTAGCGGAAATCTGAACAATGAAACACAGAGCACTGAGAGGCAAGATGATCGTTTTGATACTGGAGGAAAAGGTAACGAGACTAACACCCTTGAAGAAGCATCTGATCGCATTAGAAGAGGGTCAGCAGGTGTTGCAGGATCCATGATGCTAATGAATTCGCACCAGAGAATGCATGCTCCATTTACTCAGGATGCACAACCAATGACAGAAGATATGCACGAAGAACGGCTGCATGCTGTTGCAGCATTTGGTGATTCTTTTAGTTTTTCTGCTCAGCTAGAGAGAGAGATCTTATTGTCAGACATGTCAGCTTTCAAAGCGGCGAATCCAGATGCTGTATTTGAGGATTTTATTCGTTGGCATTCACCTGGGGATTGGGAAAATAATGGCATAGAGGATGGTGAAGTTTCAGGAACTGCAGTAAATGATGATTGGCCTCCAAAGGGACGACTCTCCAAGAGAATGTCTGAGCAAGGGAACTTTTGGCGGAAATTATGGAATGATGCACCTGCTTTGCCAGCTTATGATCAGAAACCACTTTTTGATCCAAATCGAGAAGGAGAAAAGATTCTTCATTACTTGGAGACATTGCGACCTCATCAGCTGCTCGAGCAGATGGTTTGTACTGCATTCAGAGCCTCAGCTGATACATTAAACCAGACAAACTTTGGTGACTTGACTCCAATGAAGACCAAGCTTGATCAGCTTTACCTAACTATGGCCTCTGTGCTAAGAACTTTGCAAGCAAATCAACTTTCTCAGGACGGTGAGATTTTCGAAGATCTCAAACGGCTGTGTGTCATATTTGAACATGTGGAGAGATTGACAATTCTAGCAGCTTCTCTTCACCAGAAGTTTATTGAGGCACCGCGGCTTTCCAGAGCAATATTCAGTGACTTCTACAACTTCTATCTTCCCAGAATGGGTAATAGTACCCTTGAAGTTGACTTTCACAAGGAGTTTGACCAAAACCAGGCAGTAAGGATGGATGAAAGGAATGTTGTGGCAGATCTATTCACACCTCCTACCCCTAATCAGTCATGGAGAAAAGTTTTAAGCATGGGGAATCTTCTTAATGGCCATGAACCAGTGCTTAGAGAAATAATATTTTCGATGCGTGATGATGTTACTGGTCATCATTATGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_32430.p1 GENE.S_Transcript_32430~~S_Transcript_32430.p1 ORF type:3prime_partial len:467 (+),score=119.33,Rab3-GTPase_cat|PF13890.2|1.9e-57,Rab3-GTPase_cat|PF13890.2|8.5e+03,Rab3-GTPase_cat|PF13890.2|4.8e+03 S_Transcript_32430:1513-2910(+)
MLWIEFVREVRWCWEESQPLPKIPANGVIDLSSCLIHQKLQMLAICIEKKREVNAEFFDAEGKDEVSVYSEEEDQLQEDLLHRSSGNLNNETQSTERQDDRFDTGGKGNETNTLEEASDRIRRGSAGVAGSMMLMNSHQRMHAPFTQDAQPMTEDMHEERLHAVAAFGDSFSFSAQLEREILLSDMSAFKAANPDAVFEDFIRWHSPGDWENNGIEDGEVSGTAVNDDWPPKGRLSKRMSEQGNFWRKLWNDAPALPAYDQKPLFDPNREGEKILHYLETLRPHQLLEQMVCTAFRASADTLNQTNFGDLTPMKTKLDQLYLTMASVLRTLQANQLSQDGEIFEDLKRLCVIFEHVERLTILAASLHQKFIEAPRLSRAIFSDFYNFYLPRMGNSTLEVDFHKEFDQNQAVRMDERNVVADLFTPPTPNQSWRKVLSMGNLLNGHEPVLREIIFSMRDDVTGHHYA

Click here to download the sequence:
Link to NCBI Protein BLAST