Transcript Information: S_Transcript_324346.p1


Annotated TAIR IDAT5G20170.1
Annotated Gene NameRNA polymerase II transcription mediators
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6807554-6810729 | Reverse length=653
E-Value2E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2608815742711
Replicate 23.1393692651009
Replicate 32.8429514120965
Condition 2: 8 Hour
Replicate 14.9731147379875
Replicate 25.0402979148791
Replicate 35.3921511728016
Condition 3: 24 Hour
Replicate 13.1947062812331
Replicate 24.6581747113441
Replicate 34.4861343803566


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_324346.p1 GENE.S_Transcript_324346~~S_Transcript_324346.p1 ORF type:5prime_partial len:253 (-),score=40.64 S_Transcript_324346:2-760(-)
CAGTCTGCTCAGCAGGGGAAAGATGCTCTTGGACTTGTGAGTCATTTCTGCTTGTCTCTGGCTCACAGAATCTTCTCAAGCAAAGTTATGAAGGAGCTGGAAAACTTGGTTGTCAAGATTCCTTATCTCCAGTTAATAACACAACCTACATGGCATTCCCGAACTTCTTCGTGGACATTATCTGTGAAAGTTCCTCAATCCATAGTAGATGCACGATCTCAGGCATGGAGATCAGATGAACATCAGATAATAAGAACTTCCAAATCACTGTTCCAAACTAAGGTGGTGGTGAAAGATGATTCCATCACCATTGAAGGGGGAGGTGCCCCTAGTGCTGTCACTTTGTTCAAGTCTAATCCAGAGTCTGCAGGCTCCAAGAACAGATTCAGTTGTGACCTGGTCGATCTTCCTATGGTACTTTTGTTGCAGGTAGCTAGTAAGATCATAAAGTGGCTTCACGAAGAGGCATTGACGGTGGGTATAAAGACTAAGCCAGATTTTCTGTGTCTTTCTTTGGAGCTGGATCAAGGGGAAACACTTAGCCTTGTCGCACATGTTGACCCAAACGATGCTCTGGGTTGTATTTCTTGGTGGTTGACGATAGAGAACGGAATTACCAAGGAACGCGAACTTCAGGCAGATCTCGCTGATGATGACGAGTCTGGTAGTAGGCGGTTTTTGGGTTATTTATCGTTGGACGAGCTGTACTCGACCATGATGGACCTTGTCAGTTTGTCCACCGGCAGCGTTAATCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_324346.p1 GENE.S_Transcript_324346~~S_Transcript_324346.p1 ORF type:5prime_partial len:253 (-),score=40.64 S_Transcript_324346:2-760(-)
QSAQQGKDALGLVSHFCLSLAHRIFSSKVMKELENLVVKIPYLQLITQPTWHSRTSSWTLSVKVPQSIVDARSQAWRSDEHQIIRTSKSLFQTKVVVKDDSITIEGGGAPSAVTLFKSNPESAGSKNRFSCDLVDLPMVLLLQVASKIIKWLHEEALTVGIKTKPDFLCLSLELDQGETLSLVAHVDPNDALGCISWWLTIENGITKERELQADLADDDESGSRRFLGYLSLDELYSTMMDLVSLSTGSVNP*

Click here to download the sequence:
Link to NCBI Protein BLAST