Transcript Information: S_Transcript_32436.p2


Annotated TAIR IDAT5G58510.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23648287-23654421 | Reverse length=963
E-Value1E-134
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7343883598973
Replicate 26.4225910302199
Replicate 32.9826527358923
Condition 2: 8 Hour
Replicate 17.9898362643706
Replicate 29.0452218219919
Replicate 37.0095240102634
Condition 3: 24 Hour
Replicate 16.0647520202997
Replicate 25.5590481225003
Replicate 36.2545231408913


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_32436.p2 GENE.S_Transcript_32436~~S_Transcript_32436.p2 ORF type:complete len:371 (+),score=77.63,Rab3-GTPase_cat|PF13890.2|2.4e-55,Rab3-GTPase_cat|PF13890.2|4.6e+03,Rab3-GTPase_cat|PF13890.2|3.2e+03 S_Transcript_32436:1881-2993(+)
ATGATGCTAATGAATTCGCACCAGAGAATGCATGCTCCATTTACTCAGGATGCACAACCAATGACAGAAGATATGCACGAAGAACGGCTGCATGCTGTTGCAGCATTTGGTGATTCTTTTAGTTTTTCTGCTCAGCTAGAGAGAGAGATCTTATTGTCAGACATGTCAGCTTTCAAAGCGGCGAATCCAGATGCTGTATTTGAGGATTTTATTCGTTGGCATTCACCTGGGGATTGGGAAAATGATGGAAAAGAGGATGGTAACGTTTCAGGAACTGCAGTGAATGATGATTGGCCTCCAAAGGGACGACTCTCCAAGAGAATGTCTGAGCAAGGGAACTTTTGGCGGAAATTATGGAATGATGCACCTGCTTTGCCAGCTTATGATCAGAAACCACTTTTTGATCCAAATCGAGAAGGAGAAAAGATTCTTCATTACTTGGAGACATTGCGACCTCATCAGCTGCTCGAGCAGATGGTTTGTACTGCATTCAGAGCCTCAGCTGATACATTAAACCAGACAAACTTTGGTGACTTGACTCCAATGAAGACCAAGCTTGATCAGCTTTACCTAACTATGGCCTCTGTGCTAAGAACTTTGCAAGCAAATCAACTTTCTCAGGACGGTGAGATTTTCGAAGATCTCAAACGGCTGTGTGTCATATTTGAACATGTGGAGAGATTGACAATTCTAGCAGCTTCTCTTCACCAGAAGTTTATTGAGGCACCGCGGCTTTCCAGAGCAATATTCAGTGACTTCTACAACTTCTATCTTCCCAGAATGGGTAATAGTACCCTTGAAGTTGACTTTCACAAGGAGTTTGACCAAAACCAGGCAGTAAGGATGGATGAAAGGAATGTTGTGGCAGATCTATTCACACCTCCTACCCCTAATCAGTCATGGAGAAAAGTTTTAAGCATGGGGAATCTTCTTAATGGCCATGAACCCGTGCTTAGAGAAATAATATTTTTGATGCGTGATGACGTTACTGGTCATCATTATGCAGGCCATTCTCCTACAGGTTTTCAACAAGAGATCGAAACTTACCGCATGTATATACACGGAACCTCAAATGACCTCAGGGTGGCACTTTCCGTAGTCTCATGTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_32436.p2 GENE.S_Transcript_32436~~S_Transcript_32436.p2 ORF type:complete len:371 (+),score=77.63,Rab3-GTPase_cat|PF13890.2|2.4e-55,Rab3-GTPase_cat|PF13890.2|4.6e+03,Rab3-GTPase_cat|PF13890.2|3.2e+03 S_Transcript_32436:1881-2993(+)
MMLMNSHQRMHAPFTQDAQPMTEDMHEERLHAVAAFGDSFSFSAQLEREILLSDMSAFKAANPDAVFEDFIRWHSPGDWENDGKEDGNVSGTAVNDDWPPKGRLSKRMSEQGNFWRKLWNDAPALPAYDQKPLFDPNREGEKILHYLETLRPHQLLEQMVCTAFRASADTLNQTNFGDLTPMKTKLDQLYLTMASVLRTLQANQLSQDGEIFEDLKRLCVIFEHVERLTILAASLHQKFIEAPRLSRAIFSDFYNFYLPRMGNSTLEVDFHKEFDQNQAVRMDERNVVADLFTPPTPNQSWRKVLSMGNLLNGHEPVLREIIFLMRDDVTGHHYAGHSPTGFQQEIETYRMYIHGTSNDLRVALSVVSCD*

Click here to download the sequence:
Link to NCBI Protein BLAST