Transcript Information: S_Transcript_32440.p1


Annotated TAIR IDAT1G15740.1
Annotated Gene NameLeucine-rich repeat family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:5411509-5414544 | Forward length=585
E-Value7E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.491977806101
Replicate 213.009245862828
Replicate 312.551306501339
Condition 2: 8 Hour
Replicate 116.626803687916
Replicate 218.064137885234
Replicate 316.928873918603
Condition 3: 24 Hour
Replicate 114.632210469394
Replicate 212.676854202427
Replicate 313.78932478209


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_32440.p1 GENE.S_Transcript_32440~~S_Transcript_32440.p1 ORF type:complete len:1584 (+),score=246.50,PIF1|PF05970.10|2.9e+03,PIF1|PF05970.10|4.1e-105,Helitron_like_N|PF14214.2|3.6e-60,Helitron_like_N|PF14214.2|4.3e+03,AAA_30|PF13604.2|1.4e-07,Herpes_Helicase|PF02689.10|1e-06,LRR_4|PF12799.3|5.9,LRR_4|PF12799.3|68,LRR_4|PF12799.3|0.0044 S_Transcript_32440:332-5083(+)
ATGGGTGGAGTCTGTTCGAGGAAGAGGGGAAACCAGGTTAACGAAGATGGTTTGCGGATAGGGGTCAGTCGAAGATACTGTAAAAATGGAAGTTCAAAATGGTTGCTTGGGACCCCCTATTTTAGGACTTCATCTTTTTCCCAACCAGAAGGTCGCAGTTGCCCTTCTCTCATGGAACTATGCATTCAGAAGATTCGTCAGGATATCAACAAATATAGCTCATTCTCGGTTCTTCCAAGGGATATAAGTCAACAAATATTCGATGAGTTAGTCTGTTCACATTGCCTTACAGATGTCTCACTTGAAGCTTTTCGAGACTGTGCTCTTCAGGATATCTGTCTGGGAGATTATCCTGGGGTTGTCGACAGTTGGGTTGATGTCATCTCTTCACAAGGGTCTTCCCTACTGTCTGTTGATATTTCTGGTTCTGATGTGACAGATTCTGGTTTGAGTCTCCTGAAAAGTTGCCCTAATCTTCAAGCCTTAACTTTCAATCACTGCGATCATATTTCAGAACATGGGCTTAGACATATTAGTGGACTTCAAAACCTAGTTTCTTTGAGTTTTAGAAGGGGTTATGCCATCACTGCTGAAGGAATGCGTGCCTTTTCCAGCTTAAACAACTTGTTGGAATTGGATCTTGAGCGATGTTCTGGGATTCATGGTGGTTTTGTTCATCTTAAAGGTCTCAAGAAGCTGAAGACCCTTAATATTAGGTATTGTAAATGCATCACAGACTCAGATTTGAAAGCTCTTTCAGATCTTACCAGCTTGAGGGAGTTGCAAGTCTCTTGCAGCAGCATTACGGATATTGGAGTTTCTCATCTTAAAGCCATGAAGCCAAGTGCTGCAGTGAAAAGGGCGTGTGGACATAATCAGTGTGAGAAGGCTGAATCTGAACAGCAGTCAAGTACACTTGATAGCATTGAGGGGACGTGTATGACTTTGCAAGGCAAAGCTGTCAAATGTCGACGTGTATGGACTCATTCACGTCGTGTTTCTACAGATTCTAATGTGGAGACTTCAAGACAGCAAGTTGGACTGCGGATGACTTCACAAGGAAAAGCTGTCAAGAGCAGGCGTGTATGGTGTCACTCTCCACAAGAATCTGTAACGACACAATTGGCAGTGCCAGCTACAACAGCAAATCCTCTTGGATCCACTTTGAGGACATCTCCATTGGAGCTACCAACACCCACCATCTGCATACAATGTTCTGCGAAAAAATTTGCATTTGAAAGCCCGGCTTTCTGCTGTGGCAATGGCACAATTACGCCAATGGCTCTTCAGTGGCCAGGTGATCTAAAGCAGCTATACACTTCAGTTGATGAAGATGCTATTCATTTTCAAAGATTTGCTCGAGTTTATAACAATCTATTTGCTTTTAGCTCTCTTGGTGGTGGTATCAATGCAGACACTAAAAAAGTTGCAGCAAGCAGCAAAGGCAAGAAACGCACAATGGTATCGTGCCGTGAATTTTATGCATGCAACCTCCAAATTCGAGCTGGCAATTATTTGTTGCGTACTTGTAGGCTATTCCAGCAATACCTTGTGGACATGTATGTGAAAATTGAGAACACTAGACTTGACTTTTTTCGGCAAAATCAAAAACAAATTCGCGCAGAGTTGTATCAAGGAATCGTAGACTCTCTAGGAAACGGTGAAGTCAACGGCAGGAATATTGGTCATCGTGTTGTGCTCCCTCCAACCTTTATTGGTGGACCCAGAGACATGAACAGAAGATATCTCAATGCAATGGCTCTTGTCCAGAAGTTTGGCAAACCAGATATATTTCTTACCATGACTTGCAATCCAAAATGGAAAGAAATCCAAGATGAATTGGCAGATGGTGAAAAAGTCGAGAATAGACCAGACTTAGTTGCAAGGATCTTTCACAGTAAGCTTATGATGCTAAAGAAAAAAATCATGGAGGATGAATTCTTCGGACCTGTTGCAGGAATGATTTATGTTGTTGAGTTTCAAAAGCGTGGGCTACCTCATGTCCACTTCTTGATAATACTTAAGGATGGTTTCAAGATCAACACTGTTGAGCAGTATGACAAGTTTGTTTGTGCCGAAATTCCCTCAGAAGACCAGCCATATTTGCGATCGCTTGTTCTTAAGCATATGATGCACGGGCCATGTGGACCAATGTTCCCTGATTGTCCATGCATGCAGACAAAAGGTGGTGTGGCAAAGTGCCGCAGTAACTTCCCAAAAAAGCATGTTGAGTTCACAACACATAGCAACGACGGCTACCCTTTATACAGACGAAGAATCACTACTGACACAATCACAATACGGAAGATGAAGATGGGCAATCAGTGGGTTGTGCCCTACAACCCAGAACTATTAGCATTGTTTGATTGCCATATCAACGTCGAGATTTGCTCAACCATTTCAGCCGTGAAATATCTTTACAAGTATGTTTACAAAGGCCATGACAAGATTTCGTTTGCACTTGCTTCAACGGACAAACCAATAGATGAAATTCATACTTTCCAAGCTGGTAGATGGATCTCTCCTCCGGAGGCTGCATGGCGCATTTTTGGTTTTGACCTTTATGACATGTACCCATCTGTCCTTCCACTTCAGGTGCATTTGCCAAACAAGCAAACGGTGTCATTTTCACATTCTGAGAAGTTATCTTCTGTCGTTCAGAATCGTCTGAAATATGAAACACAGTTGACAGCTTTCTTCAGATGGAATGCTGCCCAGCCAGAGAGACCAAAAATCCTTTATTCTGATTGCCCTGAACACTTTGTCTGGAACAAGAAAGCAAAAGAGTGGACATCTAGAATAGGCAAGAAGCAAATAGGAAGGCTTGTCTTTGTTTCTCCTGCTGAAGGAGAACGTTATTTCCTACGATTGTTGCTATGCCATGTACATGGACCGACATCCTTTGATGATTTGCTCACAGTTGAGGGATATAAGTGTCAAACCTTCAAAGCAGCGGCTATGAAGAGAGGGCTGGTAGAAGCTGATGATGCTGTTGATCAATGCCTCAAGGAAGCTGTAGAATTTCAGATGCCAAGTGCGCTACGCCAGCTTTTTGCAACCTTACTGCTATTCTCGCAACCTGTTGATCCAAAAAGGTTGTGGGAAAAATATTTTGGTGCATTATCTGAAGATTTCAAATACACATATCCTGATGATGTTAAAAAAGTCCAGTACTTAACATGTGCAGATGTTGCACATCTTCTTCAGTCAGCTGGCAAGACATTCATGGACTTTGATTTACCTCAACTTCACAAGATTGCACAAGACACTCACAATTTAGCTTGCTCGCGAGATATAATTGACGCAATCAATGCACCAGTCCCGCCACACTTTATTGGTCTTTCAAAGCAATTAAACCGCAAGCAACGACAAGCATACAAAAGTATCATGGCTTGCATCAAGCATGAGAAAGGAGGAGCATTCTTTATCGATGGGCCTGGTGGAACAGGAAAGACTTTCCTCTATTGTGCAGTATATGCTAAAGTACGCATGATGGGCAAGATCGTTCTGCCAACAGCAAGCTCAGGCATAGCAGCTTCCAATATTCCAAGTGGTCGAACCGCACATTCACGGTTCAAGATACCTCTAGACAGTAGTGATTCTATGGTGTGCAGCGTACCTAAACAAAGTGATCTTGCCAAGCTTTTGAGAGAAGCTGCACTGATAATTTGGGACGAAGCATCAATGGCTAGAAAAGAGAGCATTGAGGCGGTAGACCGACTACTACAAGATGTTTGCAGCTCCACTTTGCCGTTTGGTGGCAAGGTGATTGTCTTTGGTGGTGATTTTAGACAGGTGTTGCCCGTAATTCCTAAGAGAACACAACATGAATTGGTTGAGCATATCCTTGTTAGTTCTTATCTGTGGCCAACGTTCAAGAGATTCACGCTCACAGAAAACATGCACGCCAGAGAAGACCCACATTACAGTGATTTCTTGCTCAAACTTGGGAATGGTGATTTACAGCGTTGTGAACAAGAAGATATCAAGTTGCCACAATCTTTTTTCTCAATACTTCCATCAAGTGAGGACTGCCTAGCACATCTTGTCGATTCCATATTTCCAGATATTGGTCACCTTGCAGCACATCCACATGCTTTTACCTCACGCGCAACACTAACTCCGACGAATGATGAGGTTGATTGTATCAACCAAATGGTGATAGACAATTTCCCAGGCAAGGCATACACTTACAAGAGTTATGACACCACTGTCAATGACGATTGCAATGCTCACCCTATTGAATTTCTCAACACTCTGTGTCCGAGAGGTATGAGCCCACACTGTCTAACACTGAAAGTGAATTGCCCTATCATATTGCTTCGGAATCTTAACCCCTCTGTCTGCTTATGCAATGGGACTAGGCTCATCTGTCGAGACTTTAGAGCTAATGTTATTATATGTGAGATAGCGACTTGGTACCGTGCTGGTGACTATGTTTTCATTCCACGAATCACCCTCAACCCATCGTCTTCTATTACTTATCCATACAGATTTGAGAGAAGGCAATTTCCAATAAAGCTTTGCTTTGCAATGACCATAAACAAATCACAAGGACAAACACTTACTGATGTTGCTGTTTACCTTCGAAGACAATGCTTCTCCCACGGGCAACTGTATGTTGCACTATCAAGGGCCAAAAAGGCAAGTAGTGTCAAGTTGTTTGTCAAGCCTGGCAAAGAAAGTGAAACAAATTCAACATCCGTCACCAATATTGTGTCATTTGATTTGTGCCAGAGCACTTTCAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_32440.p1 GENE.S_Transcript_32440~~S_Transcript_32440.p1 ORF type:complete len:1584 (+),score=246.50,PIF1|PF05970.10|2.9e+03,PIF1|PF05970.10|4.1e-105,Helitron_like_N|PF14214.2|3.6e-60,Helitron_like_N|PF14214.2|4.3e+03,AAA_30|PF13604.2|1.4e-07,Herpes_Helicase|PF02689.10|1e-06,LRR_4|PF12799.3|5.9,LRR_4|PF12799.3|68,LRR_4|PF12799.3|0.0044 S_Transcript_32440:332-5083(+)
MGGVCSRKRGNQVNEDGLRIGVSRRYCKNGSSKWLLGTPYFRTSSFSQPEGRSCPSLMELCIQKIRQDINKYSSFSVLPRDISQQIFDELVCSHCLTDVSLEAFRDCALQDICLGDYPGVVDSWVDVISSQGSSLLSVDISGSDVTDSGLSLLKSCPNLQALTFNHCDHISEHGLRHISGLQNLVSLSFRRGYAITAEGMRAFSSLNNLLELDLERCSGIHGGFVHLKGLKKLKTLNIRYCKCITDSDLKALSDLTSLRELQVSCSSITDIGVSHLKAMKPSAAVKRACGHNQCEKAESEQQSSTLDSIEGTCMTLQGKAVKCRRVWTHSRRVSTDSNVETSRQQVGLRMTSQGKAVKSRRVWCHSPQESVTTQLAVPATTANPLGSTLRTSPLELPTPTICIQCSAKKFAFESPAFCCGNGTITPMALQWPGDLKQLYTSVDEDAIHFQRFARVYNNLFAFSSLGGGINADTKKVAASSKGKKRTMVSCREFYACNLQIRAGNYLLRTCRLFQQYLVDMYVKIENTRLDFFRQNQKQIRAELYQGIVDSLGNGEVNGRNIGHRVVLPPTFIGGPRDMNRRYLNAMALVQKFGKPDIFLTMTCNPKWKEIQDELADGEKVENRPDLVARIFHSKLMMLKKKIMEDEFFGPVAGMIYVVEFQKRGLPHVHFLIILKDGFKINTVEQYDKFVCAEIPSEDQPYLRSLVLKHMMHGPCGPMFPDCPCMQTKGGVAKCRSNFPKKHVEFTTHSNDGYPLYRRRITTDTITIRKMKMGNQWVVPYNPELLALFDCHINVEICSTISAVKYLYKYVYKGHDKISFALASTDKPIDEIHTFQAGRWISPPEAAWRIFGFDLYDMYPSVLPLQVHLPNKQTVSFSHSEKLSSVVQNRLKYETQLTAFFRWNAAQPERPKILYSDCPEHFVWNKKAKEWTSRIGKKQIGRLVFVSPAEGERYFLRLLLCHVHGPTSFDDLLTVEGYKCQTFKAAAMKRGLVEADDAVDQCLKEAVEFQMPSALRQLFATLLLFSQPVDPKRLWEKYFGALSEDFKYTYPDDVKKVQYLTCADVAHLLQSAGKTFMDFDLPQLHKIAQDTHNLACSRDIIDAINAPVPPHFIGLSKQLNRKQRQAYKSIMACIKHEKGGAFFIDGPGGTGKTFLYCAVYAKVRMMGKIVLPTASSGIAASNIPSGRTAHSRFKIPLDSSDSMVCSVPKQSDLAKLLREAALIIWDEASMARKESIEAVDRLLQDVCSSTLPFGGKVIVFGGDFRQVLPVIPKRTQHELVEHILVSSYLWPTFKRFTLTENMHAREDPHYSDFLLKLGNGDLQRCEQEDIKLPQSFFSILPSSEDCLAHLVDSIFPDIGHLAAHPHAFTSRATLTPTNDEVDCINQMVIDNFPGKAYTYKSYDTTVNDDCNAHPIEFLNTLCPRGMSPHCLTLKVNCPIILLRNLNPSVCLCNGTRLICRDFRANVIICEIATWYRAGDYVFIPRITLNPSSSITYPYRFERRQFPIKLCFAMTINKSQGQTLTDVAVYLRRQCFSHGQLYVALSRAKKASSVKLFVKPGKESETNSTSVTNIVSFDLCQSTFR*

Click here to download the sequence:
Link to NCBI Protein BLAST