Transcript Information: S_Transcript_32462.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value6E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.8725574175469
Replicate 20.72337014942671
Replicate 30.90701980739019
Condition 2: 8 Hour
Replicate 16.8753990639937
Replicate 24.5232699435513
Replicate 34.1932814960619
Condition 3: 24 Hour
Replicate 11.4324513764324
Replicate 22.2292273681653
Replicate 31.1026030341034


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_32462.p1 GENE.S_Transcript_32462~~S_Transcript_32462.p1 ORF type:complete len:183 (+),score=4.49,PIF1|PF05970.10|2.8e-07,Herpes_Helicase|PF02689.10|1.2e-06 S_Transcript_32462:65-613(+)
ATGAGCCCACATAATTTAATATTGAAGCTCAATTGCCCAGTCATATTGCTAAGGAATCTAAATCCATCAGTTGGATTATACAATGGAACAAGGCTCATTTGTAGAGGGTTCAAACATAACCTCATTATCTGTGAAATTTCAACGGGATATCGAGCAGGTGATTTTGTGTTCATACATCGAATAAGTTTGAGGCCATCAAACTCCATTGCATACCCGTACAAATTTGAGTGCAAGCAGTTTCCAATAAAATTGTGTTTTGCAATGACAATTAATAAATCTCAAGGTCAAACACTCACACAAGTTGGAGTGTACCTTCAGAAGCAGTGTTTCTCACATGGACAGTTGTATGTCGCACTCTCGAGAGCCAAAAAATCAAGTACTGTCAAAGTTTTTGTTGATGCCGACAAGAGCTCACATGAACGTCGACCCACTGTCACGAACGTCATCTTATTTGACCTACTCAGAAAAGCTGGCATACTTGAACAATCAGAGATACTAGACGCAGGCCAGAACATATCTGTTGATATAAACGAGGATGAAAACTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_32462.p1 GENE.S_Transcript_32462~~S_Transcript_32462.p1 ORF type:complete len:183 (+),score=4.49,PIF1|PF05970.10|2.8e-07,Herpes_Helicase|PF02689.10|1.2e-06 S_Transcript_32462:65-613(+)
MSPHNLILKLNCPVILLRNLNPSVGLYNGTRLICRGFKHNLIICEISTGYRAGDFVFIHRISLRPSNSIAYPYKFECKQFPIKLCFAMTINKSQGQTLTQVGVYLQKQCFSHGQLYVALSRAKKSSTVKVFVDADKSSHERRPTVTNVILFDLLRKAGILEQSEILDAGQNISVDINEDENS*

Click here to download the sequence:
Link to NCBI Protein BLAST