Transcript Information: S_Transcript_324682.p1


Annotated TAIR IDAT1G74900.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)OTP43
Annotation TypeOrtholog
Chromosome Positionchr1:28133933-28135381 | Forward length=453
E-Value3.5E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.66342857711
Replicate 29.9735897999724
Replicate 312.379370795841
Condition 2: 8 Hour
Replicate 112.196370489593
Replicate 212.411779039848
Replicate 310.584924324391
Condition 3: 24 Hour
Replicate 19.426216848681
Replicate 210.012437305989
Replicate 37.7739177960974


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_324682.p1 GENE.S_Transcript_324682~~S_Transcript_324682.p1 ORF type:5prime_partial len:292 (-),score=57.77,PPR_2|PF13041.2|5.7e-13,PPR_2|PF13041.2|5.8e-16,PPR_2|PF13041.2|1.7e-16,PPR_2|PF13041.2|3.3e-19,PPR_2|PF13041.2|8.8e-16,PPR_2|PF13041.2|2.7e-13,PPR_2|PF13041.2|6.1e-05,PPR_1|PF12854.3|5.2e-07,PPR_1|PF12854.3|1.8e-08,PPR_1|PF12854.3|2.5e-10,PPR_1|PF12854.3|1.8e-10,PPR_1|PF12854.3|2.3e-09,PPR_1|PF12854.3|1.6e-10,PPR_1|PF12854.3|0.24,PPR_1|PF12854.3|1.4e+03,PPR|PF01535.16|0.0012,PPR|PF01535.16|8.3e-08,PPR|PF01535.16|1.2e-08,PPR|PF01535.16|4.3e-08,PPR|PF01535.16|3.3e-06,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|38,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|0.00012,PPR_3|PF13812.2|7.9e-05,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.00013,PPR_3|PF13812.2|0.00079,PPR_3|PF13812.2|7.3 S_Transcript_324682:360-1235(-)
TTTAGACCTGATGTTGTTAGTTATAATACTATTGTTAATGGTTGGTGTTTGGTTAAGAGGACACCTAAGGCTTTGGCTGTGTTGAAGGAGTTGGTTGATAAGGGTTTAAGCCCTACATTGACTACTTATAACATTATGTTAAAAGGGTTTTTTCGGGCGGGCCAAACTCGGGAAGCGTGGCGGTTCTTTTTGGAGATGAAGAAGAGGAAAGTTGAGATCGACGTGGTTACTTATACTACTGTCATTCATGGGTTTGGTGTTGCTGGGGATGTTGGTAAAGCTAGGAGGTTGTTTGATGAGATGGTTAAGGAAGGTGTTCTTCCTAATGTCGCGACTTATAATGCGTTGATCCAGGTCATGTGTAAGAAGGATAGTGTTGATAACGCGATGGGTTTGTTCGAGGAGATGGTTAGGAAAGGGTATATGCCTAATGTGATGACTTATAATTTGTTGATTAGAGGGTTTTGTCATCGAGGGGAGATGGATCGTGGGATGGAGTTTGTTGGGTTGATGAAGAATGAGGGGTGTGAACCTAATGTCCAGACATTTAATCTGTTGATTAGGTACTATTGTGACGCAGGGGAGCTTGAGAAGGCTTTGGATGTTTTGGATAGGATGGGATCAGGGGAGTGCTTGCCGAATTTGGATACATATAATGTACTGATAAGTTCAATGTTTGTAAGGCGGAAATCCGAGGATTTGGTGGTTGCTGGTAGGTTGTTAGTTGAGATGGTTGAAAGAGGATTTGTTCCTACTAGGCTTACTTTTAAGCGCGTTCTAGATGGGCTTCTTGTGACAGGCAATCAGTCATTTGCGAGAGAGATTTTACGACTACAAAGTAAATGTGGATTTCTTCCTCGGAACTTCAGATTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_324682.p1 GENE.S_Transcript_324682~~S_Transcript_324682.p1 ORF type:5prime_partial len:292 (-),score=57.77,PPR_2|PF13041.2|5.7e-13,PPR_2|PF13041.2|5.8e-16,PPR_2|PF13041.2|1.7e-16,PPR_2|PF13041.2|3.3e-19,PPR_2|PF13041.2|8.8e-16,PPR_2|PF13041.2|2.7e-13,PPR_2|PF13041.2|6.1e-05,PPR_1|PF12854.3|5.2e-07,PPR_1|PF12854.3|1.8e-08,PPR_1|PF12854.3|2.5e-10,PPR_1|PF12854.3|1.8e-10,PPR_1|PF12854.3|2.3e-09,PPR_1|PF12854.3|1.6e-10,PPR_1|PF12854.3|0.24,PPR_1|PF12854.3|1.4e+03,PPR|PF01535.16|0.0012,PPR|PF01535.16|8.3e-08,PPR|PF01535.16|1.2e-08,PPR|PF01535.16|4.3e-08,PPR|PF01535.16|3.3e-06,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|38,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|0.00012,PPR_3|PF13812.2|7.9e-05,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.00013,PPR_3|PF13812.2|0.00079,PPR_3|PF13812.2|7.3 S_Transcript_324682:360-1235(-)
FRPDVVSYNTIVNGWCLVKRTPKALAVLKELVDKGLSPTLTTYNIMLKGFFRAGQTREAWRFFLEMKKRKVEIDVVTYTTVIHGFGVAGDVGKARRLFDEMVKEGVLPNVATYNALIQVMCKKDSVDNAMGLFEEMVRKGYMPNVMTYNLLIRGFCHRGEMDRGMEFVGLMKNEGCEPNVQTFNLLIRYYCDAGELEKALDVLDRMGSGECLPNLDTYNVLISSMFVRRKSEDLVVAGRLLVEMVERGFVPTRLTFKRVLDGLLVTGNQSFAREILRLQSKCGFLPRNFRL*

Click here to download the sequence:
Link to NCBI Protein BLAST