Transcript Information: S_Transcript_32553.p1


Annotated TAIR IDAT5G17240.1
Annotated Gene NameSET domain group 40
Annotated Gene Symbol(s)SDG40
Annotation TypeHomolog
Chromosome Positionchr5:5666854-5668849 | Forward length=491
E-Value2E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.151137266834
Replicate 211.611994503955
Replicate 310.030259975292
Condition 2: 8 Hour
Replicate 17.9315486793547
Replicate 27.4572828799089
Replicate 38.6011314897293
Condition 3: 24 Hour
Replicate 113.336876236363
Replicate 211.769277590524
Replicate 310.265814564889


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_32553.p1 GENE.S_Transcript_32553~~S_Transcript_32553.p1 ORF type:complete len:285 (+),score=50.58,Rubis-subs-bind|PF09273.7|6e-09 S_Transcript_32553:2557-3411(+)
ATGCTATTTGAAGGTTCCAATTGTGCTGAAAATTCTTTGTTGCTAGTTACTTCCAATAATGGAGTTGACACGTGGGATCCCGTTTTAGACGTTGAACATGCTGATGCCTGTCCAGGGCGGCTAACTGATGGTGGTTATGAGGAAGAATTCACAGCATATTGCTTTTATGCGAAGAAAAATTATAGAAAGGGTGAGCAGGTTTTATTAAGCTATGGAACGTACACAAACTTGGAGCTTCTTGAGCATTATGGATTTCTTCTGAATGAGAACCCGAATGACAAGGTCTTTATACCCCTAGGGCTTGATGTATTTATGTCTTATTCATGGCCAGCAGATTCTCTGTACATTCAGCAAGATGGAAGACCTTCATTCTCCCTCCTATCTGCTTTGCGGTTGTGGGCAACTCCTCCAAATCAGCGGAGATCTTTCGGTCACCTTGTCTTCTCTGGGTCACAGCTATCAACAGAGAATGAGATAGCAGTAATGAAACAGATAATATCAAGTTGTCGTGCTATTCTAAAGAGTCTTCCCTCAACAGTTGAAGATGACCAATTGTTACTTTGTGCAATTGACAAGACGCACGAAATTCAGTCCTTTGATAAGCCAAATAATCTGCCTTCTGCAGTTGCAAAGGAATTCTATGAATTTTCAGAATCAATGGGTTTGTACAGTGGAGGAAGTGACTTGGTTCCTTTGTCAACGAAAGTTTTAAGATCCATAGATAGATGGAAATCGGCAATTCAATGGCGGCTTAGGTACAAGCAAACACTTGTTGATTGCATTTCCTTTTGCTCTCGAACTATTGAGACTGTCTCCCTTCAAATTGGCTCCAAAAGGAGAAATATTCAGGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_32553.p1 GENE.S_Transcript_32553~~S_Transcript_32553.p1 ORF type:complete len:285 (+),score=50.58,Rubis-subs-bind|PF09273.7|6e-09 S_Transcript_32553:2557-3411(+)
MLFEGSNCAENSLLLVTSNNGVDTWDPVLDVEHADACPGRLTDGGYEEEFTAYCFYAKKNYRKGEQVLLSYGTYTNLELLEHYGFLLNENPNDKVFIPLGLDVFMSYSWPADSLYIQQDGRPSFSLLSALRLWATPPNQRRSFGHLVFSGSQLSTENEIAVMKQIISSCRAILKSLPSTVEDDQLLLCAIDKTHEIQSFDKPNNLPSAVAKEFYEFSESMGLYSGGSDLVPLSTKVLRSIDRWKSAIQWRLRYKQTLVDCISFCSRTIETVSLQIGSKRRNIQA*

Click here to download the sequence:
Link to NCBI Protein BLAST