Transcript Information: S_Transcript_32560.p2


Annotated TAIR IDAT5G17240.1
Annotated Gene NameSET domain group 40
Annotated Gene Symbol(s)SDG40
Annotation TypeHomolog
Chromosome Positionchr5:5666854-5668849 | Forward length=491
E-Value5E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4355002058634
Replicate 24.7496283075205
Replicate 36.659876919078
Condition 2: 8 Hour
Replicate 14.1466036727759
Replicate 22.7964810799658
Replicate 34.2927748648921
Condition 3: 24 Hour
Replicate 16.8265260908107
Replicate 25.6659528940868
Replicate 37.5315827043055


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_32560.p2 GENE.S_Transcript_32560~~S_Transcript_32560.p2 ORF type:complete len:144 (+),score=23.14 S_Transcript_32560:1056-1487(+)
ATGATTCTGAGAGTCCCCAAATCTGCATTAATGACAAACGAGAGTGTGACCCGGAATGATCAAAGACTTTCTCTTGCTCTTAAATTGCACCCTTCTCTTTCCAATACCCAGGTGTTGACTGTTTGCCTATTGGCTGAAATGAACAAGGGAAGGAGGTCTGCTTGGTACCCTTATCTAATGCAGTTGCCCAGAAGCTATGAAACTCTTGCAAGTTTTGGTCTGTTTGAGACAAAAGCATTGCAAGTAGATGATGCTATCTGGGTAACAGAAAAAGTTATATCAAAGGCTGAGTTAGATTGGAGAGGAGCTATTGCACTGATGGAACAACTGGAGCTGAAACATCAGTTTCTGACTTTCAAGGCCTGGCTCTGGGCTTCTGCGACAGTGAGGATGCAATTAACTATGTTAGCTAGATCACCAATAGTAAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_32560.p2 GENE.S_Transcript_32560~~S_Transcript_32560.p2 ORF type:complete len:144 (+),score=23.14 S_Transcript_32560:1056-1487(+)
MILRVPKSALMTNESVTRNDQRLSLALKLHPSLSNTQVLTVCLLAEMNKGRRSAWYPYLMQLPRSYETLASFGLFETKALQVDDAIWVTEKVISKAELDWRGAIALMEQLELKHQFLTFKAWLWASATVRMQLTMLARSPIVK*

Click here to download the sequence:
Link to NCBI Protein BLAST