Transcript Information: S_Transcript_32561.p1


Annotated TAIR IDAT5G17240.1
Annotated Gene NameSET domain group 40
Annotated Gene Symbol(s)SDG40
Annotation TypeHomolog
Chromosome Positionchr5:5666854-5668849 | Forward length=491
E-Value1E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5287957438913
Replicate 25.850905518015
Replicate 37.3363370056312
Condition 2: 8 Hour
Replicate 17.0691901603756
Replicate 25.5620618165066
Replicate 32.8264107321522
Condition 3: 24 Hour
Replicate 18.8103673746595
Replicate 210.142368716487
Replicate 310.033078437394


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_32561.p1 GENE.S_Transcript_32561~~S_Transcript_32561.p1 ORF type:5prime_partial len:181 (+),score=39.20 S_Transcript_32561:2-544(+)
AAAAAAACAATCCAAAGTCCTTTAACTACTCTTTCTTCTTCATGGGTCTTTGACACCCTATTTGCCCACCAAAGAGAGAGAGAATCAGAAACAGTCATGGAGCAGCAGCAAGCAAGTCTGGAAAGCTTTCTCAAGTGGGCAGCTGAGCTTGGTGCCTCAGACTCACCTCCTTCTTCTTCAACCTCTTCTTCCTCTTGTTTGGGTCATTCTCTATGTATCTCCTATTTTCCCACAACTGGAGGGAGGGGTTTAGCGGCTGTACGTGAGCTTAAGAAAGGGGAAATGATTCTGAGAGTCCCCAAATCTGCATTAATGACAAACGAGAGTGTGACCCGGAATGATCAAAGACTTTCTCTTGCTCTTAAATTGCACCCTTCTCTTTCCAATACCCAGGTGTTGACTGTTTGCCTATTGGCTGAAATGAACAAGGGAAGGAGGTCTGCTTGGTACCCTTATCTAATGCAGTTGCCCAGAAGCTATGAAACTCTTGCAAGTTTTGGTCTGTTTGAGACAAAAGCATTGCAAGTTTGGTCCTTACAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_32561.p1 GENE.S_Transcript_32561~~S_Transcript_32561.p1 ORF type:5prime_partial len:181 (+),score=39.20 S_Transcript_32561:2-544(+)
KKTIQSPLTTLSSSWVFDTLFAHQRERESETVMEQQQASLESFLKWAAELGASDSPPSSSTSSSSCLGHSLCISYFPTTGGRGLAAVRELKKGEMILRVPKSALMTNESVTRNDQRLSLALKLHPSLSNTQVLTVCLLAEMNKGRRSAWYPYLMQLPRSYETLASFGLFETKALQVWSLQ*

Click here to download the sequence:
Link to NCBI Protein BLAST