Transcript Information: S_Transcript_325671.p1


Annotated TAIR IDAT5G44390.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17882329-17884906 | Reverse length=542
E-Value1E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3945272774015
Replicate 25.5653883568506
Replicate 34.859910184192
Condition 2: 8 Hour
Replicate 12.7377190271995
Replicate 22.720900510237
Replicate 33.4086152701659
Condition 3: 24 Hour
Replicate 15.5104210606904
Replicate 28.6265408927989
Replicate 37.6120584465891


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_325671.p1 GENE.S_Transcript_325671~~S_Transcript_325671.p1 ORF type:complete len:444 (+),score=57.69,FAD_binding_4|PF01565.19|1.4e-28 S_Transcript_325671:86-1417(+)
ATGGCAAAACTCCTACCAATCCATGCATTTTTAACTCTCAAAATCAACCTCATTTTCTTATACTATAATCTAACTCTTCCCCTTAGCCAGGCCACAGAATCTCTTTCAACTTGTTTGACCCTTCACAAAATCACAAACTTCTCTTTATATAATTCGTCACCTGATTATAATCAGCGTCTCAGATTCTCTCTTCAAAACTTGAGAGTTTTTGCAGGACATAAAGTCCACAAACCAACGGCTATTGTCCTACCGGAGAGCAAGGAGCAGCTCATTCACACTGTTGCCTGCTGTAGGAGATCAAAATTTGAGATTACAATCCGGTGTGGTGGACACAGCTATGAGGGCTTATCCTCCATGCCACGTGGCGAAAGCCCTTTCGTCATCATTGACATGATGAATCTCAACCGTGTGATTGTTGATGTGGGGTCCGAAACGGCTTGGGTTGAAGGGGGAGCTACTTTGGGGGAGTTATACTATGCTATTGCGGAGCACAGTAGCTACTATGGGTTCCCAGCTGGGGTGGGCCCCACGGTTGGTGTGGGTGGCCATTTTTCGGGTGGCGGGTTCGGAGTTTTGGGCCGGAAGTATGGGCTTTCGGCGGACAATGTGGTGGATGCTGTGCTTATTGATGCTGAGGGCCGAGATTTGGGCCGGGTCGACATGGGGGAGGAGGTGTTTTGGGCTTTGAGAGGAGGTGGTGGTGGGAGTTGGGGGGTAGTTTACAAGTGGAAGGTCCAATTAGTGAAAATACCTAAAATAGTTACTTGCTTTAGAGTAACTAAACAAGGCCCAATTTATGAGTTAGCTGAGCTAATATACAAATGGCAATTTGTTGGTCCAAATTTAGATGATGGGTTTCATCTTTCTGTTTACCTTACTGCTAGCACAAGCAATGAAGTGTATGTCACATTTGTTGGATTCTATCTTGGTTCAAAATTTGAGGCAATCTCAATAATAAAGCATGAGTTTCAAGATTTGGAGATTGGTGAGCAAGAGTACCAAGAGATGAGCTGGATTGAATCAGTTTTATTATTCTCAGGTCTCCCAAATGGGAGCACAATCGAGGATTTAAAATCGCGGTATTGGGCAGCTAAATCTTGTGTCAAGACCAAATCTGATTATGTGAAGAAGCCCATTTCAATTGAAGGTTTGAAGGGAATGCTTGATTTCATGGTGACATCAGAACCTCAGGGGTTGGTACTTTTAGACCCTTATGGTGGAATTATGGACCGGATAAGCAGTGACTCAATTGCATTTTCTCATCGTAAAGGTAACTTGTACAACATTTTGTATGTGGCCTTTTGGAGTGACGAAGATTGTATGATTATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_325671.p1 GENE.S_Transcript_325671~~S_Transcript_325671.p1 ORF type:complete len:444 (+),score=57.69,FAD_binding_4|PF01565.19|1.4e-28 S_Transcript_325671:86-1417(+)
MAKLLPIHAFLTLKINLIFLYYNLTLPLSQATESLSTCLTLHKITNFSLYNSSPDYNQRLRFSLQNLRVFAGHKVHKPTAIVLPESKEQLIHTVACCRRSKFEITIRCGGHSYEGLSSMPRGESPFVIIDMMNLNRVIVDVGSETAWVEGGATLGELYYAIAEHSSYYGFPAGVGPTVGVGGHFSGGGFGVLGRKYGLSADNVVDAVLIDAEGRDLGRVDMGEEVFWALRGGGGGSWGVVYKWKVQLVKIPKIVTCFRVTKQGPIYELAELIYKWQFVGPNLDDGFHLSVYLTASTSNEVYVTFVGFYLGSKFEAISIIKHEFQDLEIGEQEYQEMSWIESVLLFSGLPNGSTIEDLKSRYWAAKSCVKTKSDYVKKPISIEGLKGMLDFMVTSEPQGLVLLDPYGGIMDRISSDSIAFSHRKGNLYNILYVAFWSDEDCMII*

Click here to download the sequence:
Link to NCBI Protein BLAST