Transcript Information: S_Transcript_325698.p1


Annotated TAIR IDAT5G61370.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24672008-24673471 | Reverse length=487
E-Value1.5E-197
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38729939427498
Replicate 20.13760575607598
Replicate 30.34508237994263
Condition 2: 8 Hour
Replicate 11.3744014549504
Replicate 21.0232446363284
Replicate 31.285155053107
Condition 3: 24 Hour
Replicate 10.22707779096252
Replicate 20.18847244554135
Replicate 30.47193014479427


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_325698.p1 GENE.S_Transcript_325698~~S_Transcript_325698.p1 ORF type:complete len:481 (+),score=89.22,PPR_2|PF13041.2|26,PPR_2|PF13041.2|3e+02,PPR_2|PF13041.2|8e+02,PPR_2|PF13041.2|6e-05,PPR_2|PF13041.2|8.2e-06,PPR_2|PF13041.2|4.5e-11,PPR_2|PF13041.2|6.5e+03,PPR_2|PF13041.2|5.9,PPR_2|PF13041.2|1.4,PPR|PF01535.16|0.89,PPR|PF01535.16|4.2e+02,PPR|PF01535.16|0.33,PPR|PF01535.16|3.3e+03,PPR|PF01535.16|83,PPR|PF01535.16|9.3e-07,PPR|PF01535.16|97,PPR|PF01535.16|94,PPR|PF01535.16|0.004,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|4.1,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.00012,PPR_3|PF13812.2|5.4e+02,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|4.7e+02,PPR_1|PF12854.3|8e+03,PPR_1|PF12854.3|5.2e+03,PPR_1|PF12854.3|26,PPR_1|PF12854.3|10,PPR_1|PF12854.3|5.8e+02,PPR_1|PF12854.3|7.3e+02,PPR_1|PF12854.3|0.00039,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|2.1e+02,PPR_1|PF12854.3|0.39 S_Transcript_325698:205-1647(+)
ATGCTGAAAAAATTCAACACCCACAAGTTAAAGCACTTGCCTTTATCTCTATACACCACATTGTCACATGGGCTTCTCCAGGAGCTCTGCACCCTTGTATCGACCCCAATAGGCGGCTTGGATGAGTTAGAATCCAACCTTCGTGAACATCAAGTTTCTTTAACACCATCCCTTGTAGTACAAGTTGTGAACCATTGCAAGGAGGAGGCCCCCACGAGGCGGTTGCTTCGGTTCTTCACATGGTCATGCAAGAGTTTGGGTGGTACATTGGGGGATAAGGAGTTTAATCATGCGGTTCGAGTGTTTGCTGAGAAGAAGGATCATAGAGCTATTGACATATTGTTAAATGATCTTAGGAAAGATGGAAGAGCATTGGAGCCTCAAACCTTTAGCATTGTGGCTGAAGTATTTGTAAAGTTGGGTAGAGAAGATGATGCGTTGGGTATATTTAAGAACTTGGAATCATTCAAGTGCGTACAAGATAGGACTTGTGTTGAAGCTATTGTCAATGCACTTTGTGCGAAGGGCCATGCTAAGAGAGCTGAAGGGGTGGTGTGGCATCATAGGGATAAGTTATTAGGTGTTGAGTCTCATGTTTATAGGAGTGTATTGTATGGATGGTCTATGCACGCTAATGTTAAGGAAGCTCGAAGGGTTCTCCAAGAAATGAAGTCGAAGAAGATTAGTCTTGATCTTTATTGCTTTAACAACTTCCTAAGGTGTCTTTGCGAGCATAATGTTAGGAATAACCCGTCTGGGCTTGTTCCTGAAGCTTTGAATGTGATGATGGAGATGAGAACCTATAAAGTTATTCCAAATTCGATAACTTATAATGTTCTGCTTTCGTGTTTGGCTAGGACGAGAAGGGTGAAGGAATGCCTTAGGATCCTTGATTCAATGAGAAGATCAGGTTGTGCTCCTGATTGGGTCAGTTACTATCTAGTAGTTCGTGTTTTGTACTTGACTGGAAGATTTGGGAAAGGCAATCAAATAGTGGATATGATGACAGAAGAAGGGGTGATTCCACCAGCGAAGTTTTACTATGATCTTGTTGGTGTTCTTTGTGGGGTCGAGAGAGCTAATTATGCTCTTGACCTGCTTAACCACATGAAGAAAAACTCTGTTGGCAATTACGGGCCAGTTTATGATGTTCTGATACCAAAGTTTTGCAGAAATGGTGATTTCGAAAAGGGCAAAGAGCTTTGGGACGAGGCAGAGAAGATGGGCATTGTTCTAAAATGCTCAAGAGATGTCTTGGATTCTTCAATAACCGAGGTCTTTCAACCCATAAGGAAGGATGAGGATCTGAAACTCGAAGATCCAAGTGATCTGCATACTCGAACTCAGAAGAGTAAACCTGTAGGGAATGTAAAGAAGCAAAATAACACTAGTTCAAAGAAAAAACAGAAAGCCAAGTCTAAGAAGAATGCAGCTTCAACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_325698.p1 GENE.S_Transcript_325698~~S_Transcript_325698.p1 ORF type:complete len:481 (+),score=89.22,PPR_2|PF13041.2|26,PPR_2|PF13041.2|3e+02,PPR_2|PF13041.2|8e+02,PPR_2|PF13041.2|6e-05,PPR_2|PF13041.2|8.2e-06,PPR_2|PF13041.2|4.5e-11,PPR_2|PF13041.2|6.5e+03,PPR_2|PF13041.2|5.9,PPR_2|PF13041.2|1.4,PPR|PF01535.16|0.89,PPR|PF01535.16|4.2e+02,PPR|PF01535.16|0.33,PPR|PF01535.16|3.3e+03,PPR|PF01535.16|83,PPR|PF01535.16|9.3e-07,PPR|PF01535.16|97,PPR|PF01535.16|94,PPR|PF01535.16|0.004,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|4.1,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.00012,PPR_3|PF13812.2|5.4e+02,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|4.7e+02,PPR_1|PF12854.3|8e+03,PPR_1|PF12854.3|5.2e+03,PPR_1|PF12854.3|26,PPR_1|PF12854.3|10,PPR_1|PF12854.3|5.8e+02,PPR_1|PF12854.3|7.3e+02,PPR_1|PF12854.3|0.00039,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|2.1e+02,PPR_1|PF12854.3|0.39 S_Transcript_325698:205-1647(+)
MLKKFNTHKLKHLPLSLYTTLSHGLLQELCTLVSTPIGGLDELESNLREHQVSLTPSLVVQVVNHCKEEAPTRRLLRFFTWSCKSLGGTLGDKEFNHAVRVFAEKKDHRAIDILLNDLRKDGRALEPQTFSIVAEVFVKLGREDDALGIFKNLESFKCVQDRTCVEAIVNALCAKGHAKRAEGVVWHHRDKLLGVESHVYRSVLYGWSMHANVKEARRVLQEMKSKKISLDLYCFNNFLRCLCEHNVRNNPSGLVPEALNVMMEMRTYKVIPNSITYNVLLSCLARTRRVKECLRILDSMRRSGCAPDWVSYYLVVRVLYLTGRFGKGNQIVDMMTEEGVIPPAKFYYDLVGVLCGVERANYALDLLNHMKKNSVGNYGPVYDVLIPKFCRNGDFEKGKELWDEAEKMGIVLKCSRDVLDSSITEVFQPIRKDEDLKLEDPSDLHTRTQKSKPVGNVKKQNNTSSKKKQKAKSKKNAAST*

Click here to download the sequence:
Link to NCBI Protein BLAST