Transcript Information: S_Transcript_325991.p1


Annotated TAIR IDAT5G06790.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible, petal differentiation and expansion stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2098088-2098717 | Reverse length=209
E-Value4.3E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0379325270183
Replicate 21.2919651542689
Replicate 31.1630554286955
Condition 2: 8 Hour
Replicate 11.1527238009261
Replicate 21.0077409297174
Replicate 32.0163639626334
Condition 3: 24 Hour
Replicate 10.6888026325863
Replicate 20.61253544800939
Replicate 30.79528968844961


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_325991.p1 GENE.S_Transcript_325991~~S_Transcript_325991.p1 ORF type:complete len:222 (+),score=36.95,DUF761|PF05553.7|6e-15 S_Transcript_325991:46-711(+)
ATGGTGAGCCTAACTCAACAAAAAAGCCCTATTTCTCTTCACATATTCTCAAGCATGAACAAATCCTCTACTTCATCTTCATCCATAACCACAACCATGAAGCTCAAAACCCTAATCCACAACCTTATATTCTCCCACATTTGTCGCGTCGTTCGAGCTTTTTCCAAGGCCAAAACAATCTTCCTAGAGCTCTTCAAGGAAAACCAACTTATGTGCATGAAACCACCCCAAAGAAAAGATAAGTATATGAAGAAAATACTCTTTGGTTCTTTTAGACTTCATTATAATTGGTGCTCCTCTTCTCATGTTATGCCTATTATTTCTTCATCATCCTCACCAATTTTAGAGGGCATTAATGATATTAATAGTCGTATTTACTATGACTCTACTTGGAATTCAGTTTTCTCTACTGATCTTCATCATGAGCCTTGCAATAATAGTGGTATTTATAGCAAGGAAGAAGAAGGAGAGCTCTCAAGTTATCTTCAATGGCTTGAAGAAAAAAAGAGTGGCAAGACTGAAAATATGAAGAATGATGAGGGTAATATTGAGAATGAGATTGATAAGCTTGCAGATATGTTCATTGCTAGCTGCCATGAGAAGTTCAGGTTGGAAAAGATTGAGTCCTACAGGAGATATCAAGAAATGCTTGCTAGAAGTATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_325991.p1 GENE.S_Transcript_325991~~S_Transcript_325991.p1 ORF type:complete len:222 (+),score=36.95,DUF761|PF05553.7|6e-15 S_Transcript_325991:46-711(+)
MVSLTQQKSPISLHIFSSMNKSSTSSSSITTTMKLKTLIHNLIFSHICRVVRAFSKAKTIFLELFKENQLMCMKPPQRKDKYMKKILFGSFRLHYNWCSSSHVMPIISSSSSPILEGINDINSRIYYDSTWNSVFSTDLHHEPCNNSGIYSKEEEGELSSYLQWLEEKKSGKTENMKNDEGNIENEIDKLADMFIASCHEKFRLEKIESYRRYQEMLARSM*

Click here to download the sequence:
Link to NCBI Protein BLAST