Transcript Information: S_Transcript_326235.p1


Annotated TAIR IDAT2G03880.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)REME1
Annotation TypeOrtholog
Chromosome Positionchr2:1181560-1183452 | Forward length=630
E-Value3e-323
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.059976377507644
Condition 2: 8 Hour
Replicate 10.3814297455097
Replicate 20.29101591726474
Replicate 30.31193923324363
Condition 3: 24 Hour
Replicate 10.071040271514127
Replicate 20.14740690456161
Replicate 30.20505727158631


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_326235.p1 GENE.S_Transcript_326235~~S_Transcript_326235.p1 ORF type:5prime_partial len:615 (+),score=118.23,PPR_2|PF13041.2|72,PPR_2|PF13041.2|0.00066,PPR_2|PF13041.2|2.7e-12,PPR_2|PF13041.2|5.3,PPR_2|PF13041.2|8e-06,PPR_2|PF13041.2|0.00031,PPR_2|PF13041.2|1.5e-08,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|2.2e-05,PPR_2|PF13041.2|3.2,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|4.4e-05,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|2.8e+03,PPR|PF01535.16|0.04,PPR|PF01535.16|1.2e-07,PPR|PF01535.16|2.3e-05,PPR|PF01535.16|1.4e-07,PPR|PF01535.16|1.2,PPR|PF01535.16|9.9e-05,PPR|PF01535.16|3.5,DYW_deaminase|PF14432.2|3.9e-40,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|14,PPR_1|PF12854.3|11,PPR_1|PF12854.3|0.0082,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|9.1e-06,PPR_1|PF12854.3|6.1e-05,PPR_1|PF12854.3|3.5,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|0.089,PPR_3|PF13812.2|0.099,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|30,PPR_3|PF13812.2|0.0079,PPR_3|PF13812.2|0.0024,PPR_3|PF13812.2|0.0048,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|47 S_Transcript_326235:3-1847(+)
CCAATCTTACCACAATATGCAGCAAATTTCTCCCCTTTAATGAGTGAATTTACCCAATTCTGCTATGATAGGGATTTGCGCAAAGCCATTTTAGCCATGCAACGTTTGGAAAAGCAGGGTTTATGGGCTGATTGTATAGTTTATTCTGAACTAATAAAATGTTGCATTTCCTACAGAGCAATTGAGGAAGGCAAACTTGTTCATAAGCACTTGCTGTCAAATGGGCACCCACCCAAATCATTTTTACTCTCAATGTTGCTCAACATGTATGTTAAATTTAACCTGTTGGAAGAAGCAGAGAAATTGTTTGATGAAATGCCTAAGAGAAATGTTGTCTCGTGGACTACAATGATCTCGGGTTACTCTAATGCTAAGCTTAGTAAAAAGGCGCTTGAGTCTTTGATTTTAATGCAACGAGAGGGCGTTATGCCGAATATGTATACATACTCATCAGTTTTGAGGGCTTGTGATGGGTTGTTGAGCCTTAGGCAGCTTCATTGTTGTTTATTTAAGTATGGTTTGGATTCTGATGTTTTTGTAAGGAGTTCTTTGATTGATGTGTATGCAAAGTGGGGTGAGTTGGGTAATGCACTGGCTGTTTTTAATGAGTTTGTGACTGGGGATTTGGTTGTTTGGAATTCTATAATTGGGGCTTTTGCACAGAACAGTGATGGTGATGAGGCGTTGAGTCTGTTCAAGAGGATGAAGAGGACTGGTTTCCCAGCTGAGCAAGCTAAACTGATGAGCACGCTGAGAGCTGTTACTGGCCTAGCTTTGTTGGAATTGGGAAGGCAAATTCATGTCCATGAGTTGAAGTATCCTAAGGATTTGATTCTTAACAATGCACTTCTCGATATGTATTGTAAGTGCGGTAGCTTGGATGATGCGCGCTTGGTTTTTAAGCAAATGGTGGAAAGAGATGTCATATCTTGGAGTACCATGATTACAGGGTTAGCTCAAAATGGGTTCAGTAGAGAAGCCCTAGCCTTGTTTGAGAAGATGAAACTATCAGGGACTAAGCCAAATTATATCACAATTGTTGGTGTTCTATTTGCTTGTAGCCATGGTGGTCTGTTAGAGGAGGGGTGGAGCTATTTTCGATCAATGAAGAAGCTTTATGGAATCGATGCTGGCAGGGAGCATTATGGCTGCATGATTGATCTGCTTGGAAGGGCAGGTAAGCTTGATGATGCTGTCAGGTTACTGCATGAGATGAATTGTGAACCTGATGTCGTTACTTGGAGAACTTTCCTTGGTGCATGTAGGCTTCACAAGAATGCATATATGGCTATCTATGCGGCCAAGCAAATTTTGAAGCTAGAACCGGATGATGTGGGCACATATATATTGTTGTCTAATATTTACGAGAATTCTCAGAGATGGGAGGATGCTGTGAATTTAAGAAAGATCATGAAAGAAAGAGGAATCAGGAAGGAGCCAGGATGCAGCTGGATCGAAGTTAATAAAAAGATCCATGCTTTCATCTTCAGAGATATGTCTCATCCTCAAATACATGAGATCATGGGCGAGCTGAACCAGCTGGTTCTGAGACTAAGAGGGGTGGGTTATGTTCCAGACACAAACTTCATCTTGCAAGATGTCGAGGGAGAACAGAAGGAAGACTTGCTTCAGTATCACAGCGAGAAATTGGCAATTGTATTTGGGTTGATGAGGTTGCCAAAAGGAAGTGTCATTAGGATCCAGAAGAATCTAAGGATCTGTGGGGATTGCCATCGCTTTGCCAAGCTCGTGGCAAAAGCAGAGAAGAGGGTTATTGTGATAAGAGACCAAGTAAGATACCATCATTTTAAGGATGGAGCCTGTTCCTGTGGGGATTATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_326235.p1 GENE.S_Transcript_326235~~S_Transcript_326235.p1 ORF type:5prime_partial len:615 (+),score=118.23,PPR_2|PF13041.2|72,PPR_2|PF13041.2|0.00066,PPR_2|PF13041.2|2.7e-12,PPR_2|PF13041.2|5.3,PPR_2|PF13041.2|8e-06,PPR_2|PF13041.2|0.00031,PPR_2|PF13041.2|1.5e-08,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|2.2e-05,PPR_2|PF13041.2|3.2,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|4.4e-05,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|2.8e+03,PPR|PF01535.16|0.04,PPR|PF01535.16|1.2e-07,PPR|PF01535.16|2.3e-05,PPR|PF01535.16|1.4e-07,PPR|PF01535.16|1.2,PPR|PF01535.16|9.9e-05,PPR|PF01535.16|3.5,DYW_deaminase|PF14432.2|3.9e-40,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|14,PPR_1|PF12854.3|11,PPR_1|PF12854.3|0.0082,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|9.1e-06,PPR_1|PF12854.3|6.1e-05,PPR_1|PF12854.3|3.5,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|0.089,PPR_3|PF13812.2|0.099,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|30,PPR_3|PF13812.2|0.0079,PPR_3|PF13812.2|0.0024,PPR_3|PF13812.2|0.0048,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|47 S_Transcript_326235:3-1847(+)
PILPQYAANFSPLMSEFTQFCYDRDLRKAILAMQRLEKQGLWADCIVYSELIKCCISYRAIEEGKLVHKHLLSNGHPPKSFLLSMLLNMYVKFNLLEEAEKLFDEMPKRNVVSWTTMISGYSNAKLSKKALESLILMQREGVMPNMYTYSSVLRACDGLLSLRQLHCCLFKYGLDSDVFVRSSLIDVYAKWGELGNALAVFNEFVTGDLVVWNSIIGAFAQNSDGDEALSLFKRMKRTGFPAEQAKLMSTLRAVTGLALLELGRQIHVHELKYPKDLILNNALLDMYCKCGSLDDARLVFKQMVERDVISWSTMITGLAQNGFSREALALFEKMKLSGTKPNYITIVGVLFACSHGGLLEEGWSYFRSMKKLYGIDAGREHYGCMIDLLGRAGKLDDAVRLLHEMNCEPDVVTWRTFLGACRLHKNAYMAIYAAKQILKLEPDDVGTYILLSNIYENSQRWEDAVNLRKIMKERGIRKEPGCSWIEVNKKIHAFIFRDMSHPQIHEIMGELNQLVLRLRGVGYVPDTNFILQDVEGEQKEDLLQYHSEKLAIVFGLMRLPKGSVIRIQKNLRICGDCHRFAKLVAKAEKRVIVIRDQVRYHHFKDGACSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST