Transcript Information: S_Transcript_326236.p1


Annotated TAIR IDAT2G03880.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)REME1
Annotation TypeOrtholog
Chromosome Positionchr2:1181560-1183452 | Forward length=630
E-Value1.6E-174
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.079679644416708
Replicate 20.066056256160224
Replicate 30
Condition 2: 8 Hour
Replicate 10.25539389601357
Replicate 20
Replicate 30.2552796120357
Condition 3: 24 Hour
Replicate 10.13080768557242
Replicate 20.067855723282477
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_326236.p1 GENE.S_Transcript_326236~~S_Transcript_326236.p1 ORF type:complete len:334 (+),score=61.47,DYW_deaminase|PF14432.2|1.2e-40,PPR_2|PF13041.2|2.5e-08,PPR_2|PF13041.2|53,PPR_2|PF13041.2|9.7e-06,PPR_2|PF13041.2|1.5,PPR|PF01535.16|8.9e-08,PPR|PF01535.16|0.57,PPR|PF01535.16|4.6e-05,PPR|PF01535.16|6e+03,PPR|PF01535.16|1.6,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|2.9e-05,PPR_1|PF12854.3|1.8,PPR_3|PF13812.2|0.0078,PPR_3|PF13812.2|55,PPR_3|PF13812.2|0.048,PPR_3|PF13812.2|7.4e+03,PPR_3|PF13812.2|22 S_Transcript_326236:99-1100(+)
ATGCACTTCTCGATATGTATTGTAAGTGCGGTAGCTTGGATGATGCGCGCTTGGTTTTTAAGCAAATGGTGGAAAGAGGTCATATCTTGGAGTACCATGATCGCAGGGTTGGCTCAAAATGGGTTCAGTAGAGAAGCCCTAGCCTTGTTTGAGAAGATGAAACTATCAGGGACTAAGCCAAATTATATCACAATTGTTGGTGTTCTATTTGCTTGTAGCCATGGTGGTCTGTTAGAGGAGGGGTGGAGCTATTTTCGATCAATGAAGAAGCTTTATGGAATCGATGCTGGCAGGGAGCATTATGGCTGCATGATTGATCTGCTTGGAAGGGCAGGTAAGCTTGATGATGCTGTCAGGTTACTGCATGAGATGAATTGTGAACCTGATGTCGTTACTTGGAGAACTTTCCTTGGTGCATGTAGGCTTCACAAGAATGCATATATGGCTATCTATGCGGCCAAGCAAATTTTGAAGCTAGAACCGGATGATGTGGGCACATATATATTGTTGTCTAATATTTACGAGAATTCTCAGAGATGGGAGGATGCTGTGAATTTAAGAAAGATCATGAAAGAAAGAGGAATCAGGAAGGAGCCAGGATGCAGCTGGATCGAAGTTAATAAAAAGATCCATGCTTTCATCTTCAGAGATATGTCTCATCCTCAAATACATGAGATCATGGGCGAGCTGAACCAGCTGGTTCTGAGACTAAGAGGGGTGGGTTATGTTCCAGACACAAACTTCATCTTGCAAGATGTCGAGGGAGAACAGAAGGAAGACTTGCTTCAGTATCACAGCGAGAAATTGGCAATTGTATTTGGGTTGATGAGGTTGCCAAAAGGAAGTGTCATTAGGATCCAGAAGAATCTAAGGATCTGTGGGGATTGCCATCGCTTTGCCAAGCTCGTGGCAAAAGCAGAGAAGAGGGTTATTGTGATAAGAGACCAAGTAAGATACCATCATTTTAAGGATGGAGCCTGTTCCTGTGGGGATTATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_326236.p1 GENE.S_Transcript_326236~~S_Transcript_326236.p1 ORF type:complete len:334 (+),score=61.47,DYW_deaminase|PF14432.2|1.2e-40,PPR_2|PF13041.2|2.5e-08,PPR_2|PF13041.2|53,PPR_2|PF13041.2|9.7e-06,PPR_2|PF13041.2|1.5,PPR|PF01535.16|8.9e-08,PPR|PF01535.16|0.57,PPR|PF01535.16|4.6e-05,PPR|PF01535.16|6e+03,PPR|PF01535.16|1.6,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|2.9e-05,PPR_1|PF12854.3|1.8,PPR_3|PF13812.2|0.0078,PPR_3|PF13812.2|55,PPR_3|PF13812.2|0.048,PPR_3|PF13812.2|7.4e+03,PPR_3|PF13812.2|22 S_Transcript_326236:99-1100(+)
MHFSICIVSAVAWMMRAWFLSKWWKEVISWSTMIAGLAQNGFSREALALFEKMKLSGTKPNYITIVGVLFACSHGGLLEEGWSYFRSMKKLYGIDAGREHYGCMIDLLGRAGKLDDAVRLLHEMNCEPDVVTWRTFLGACRLHKNAYMAIYAAKQILKLEPDDVGTYILLSNIYENSQRWEDAVNLRKIMKERGIRKEPGCSWIEVNKKIHAFIFRDMSHPQIHEIMGELNQLVLRLRGVGYVPDTNFILQDVEGEQKEDLLQYHSEKLAIVFGLMRLPKGSVIRIQKNLRICGDCHRFAKLVAKAEKRVIVIRDQVRYHHFKDGACSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST