Transcript Information: S_Transcript_326346.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value9E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8493780519363
Replicate 21.8323333700309
Replicate 31.5316848611804
Condition 2: 8 Hour
Replicate 12.2048284904155
Replicate 21.6304906635733
Replicate 31.8425563183967
Condition 3: 24 Hour
Replicate 13.8876487568007
Replicate 22.6505135572338
Replicate 33.6336843634489


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_326346.p1 GENE.S_Transcript_326346~~S_Transcript_326346.p1 ORF type:complete len:590 (+),score=88.74,RVT_1|PF00078.23|3e-34,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|6.3e-19 S_Transcript_326346:3263-5032(+)
ATGGTGGCAGGGGAGTTGGTAGGCCTGGAGCAGGCTGCTTTTTTGCCTAAGAGATCAATAGGAAATAATATCCTATCGACTCATGAGTTGGTCTATGCTTATAAGAGAGAGCATATTTCCCCAAAGGTGATGGTCAAGATAGATATAAGAAAGGCATATGACACTGTGGACTGGGATTTTGTTAGGGATGCTTTGATAGATTTTGGTTTCCCTGAGGTGTTTGTGGAGAGAATTATGACATGTATCACTACAGCCCAATTCTCCATCAATCTGAATGAAGGGATAAGAGGATTCTTCAAAGGAGGTTGTGGTCTGAGGCAAGGGGATCCTATGTCTCCTTACCTCTTTGTGTTGTGCATGGAGATTCTTTCTAGAATGCTCAGTATGTGTTTCTCTGATAAGGCATTCTCTGCTCATCCTAAATGCCATAAACTCAAGATTAATCATTTGGCATTTGCTGATGATCTACTATTTTTTTGTAAGGGGAATGTGAGCTCTGTCCAAACTATGAATAACACATCTAGAAGGTTCTCAGATATATCTGGTTTACAAGCAAATCAGGAGAAAAGTAATATCTATTTTGGAGGTATTGATGATTCTGTGAATGAGGAAATTTTGAGAGATACAGGGTTTAAAGAGGGTGTCATGCCTTTTAGATACTTGGGTGTTCCTTTATCCAGTACCAGGCTCACCAAAGCATTGGGTCAGCCTTTGCTGGGGTGTATCAAGAATCATATTTTTCATTGGTCCACTCTGATGCTCAGCTATGCAGGGAGGATACAGCTTTTGAATGTTATATTTGCAGTTCAAGTGCATTGGTGTTCTGTGTTTTTGCTACCCAAGGAAGTTGTATATGAAATCCAAAAAGTTAGCAGGAAAGTTCTTTGGGGGCAAAAAGAGGCAAAGACTCATTTCCTAGCTCCTATAAGTTGGGCAACTATGACTAAGCCAAAAATGGAGGGAGGGATTGGGCTGGTGGATATACATGTGTGGAATATGGCTTTTCTGTGCAAGCGGATTGCTTTGCTTGACACTAAACAAGAAGGGAGTTGGGTCTCATGGTGTGAAAAGTACTATCTCAAAGGGGTGAACTTTTGGCAATACCAGGACAGAAGCAACTCTTCATGGCTTTGGAAGAGACTACAAAAGGTGAAAGAACATCTTATCAAACTGAATGGCAGCGTAGAGCAGGCAGGGGACAATGTTAAAGAATGCTGTAAGAGTGGATCCTTTAAGGTGGGGAAAATGTATGATATAATGAGAGCTCAATCAAGCAGGTGCAGTTGGTCCAGGATACTATGGAAGACCTGTGCTAGGCCTAAGGATCAAGTGATAGCTTGGATGACATTCCACAAAAAGTTGAAGACAAAGAGCATGCTTATGAAGAGGGGGATAATCAGGGATGATACATGTCAATTATGTCAAAAGGCTCCTGAAACTTGTCACCATCTCTTCTTTGAATGTGAAGAAACAAAGATTGTATGGAGACATTTACTACATTGGATACATGCTAGGAGGGGGCCGCTCAGTTTTGGGCATGAGATTAAATGGTTCATTAGGAGGAGAAGGGGTAAGTCTATTTTGCATCATTTGCAAAGATGTGTGTTGATTACAACAGTGGCGGAGCTATGGCATGAGAGGAATATCAGAGGTTTTCAAGGCAAGAAAAGAGATTCACTGATCATTGTAAGACATATTCAGTTTGTATGTTGCCTATTATTGATGTCCAAGTTTGGACAGCAGGCTGAGTCATTTTTGAGCATTATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_326346.p1 GENE.S_Transcript_326346~~S_Transcript_326346.p1 ORF type:complete len:590 (+),score=88.74,RVT_1|PF00078.23|3e-34,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|6.3e-19 S_Transcript_326346:3263-5032(+)
MVAGELVGLEQAAFLPKRSIGNNILSTHELVYAYKREHISPKVMVKIDIRKAYDTVDWDFVRDALIDFGFPEVFVERIMTCITTAQFSINLNEGIRGFFKGGCGLRQGDPMSPYLFVLCMEILSRMLSMCFSDKAFSAHPKCHKLKINHLAFADDLLFFCKGNVSSVQTMNNTSRRFSDISGLQANQEKSNIYFGGIDDSVNEEILRDTGFKEGVMPFRYLGVPLSSTRLTKALGQPLLGCIKNHIFHWSTLMLSYAGRIQLLNVIFAVQVHWCSVFLLPKEVVYEIQKVSRKVLWGQKEAKTHFLAPISWATMTKPKMEGGIGLVDIHVWNMAFLCKRIALLDTKQEGSWVSWCEKYYLKGVNFWQYQDRSNSSWLWKRLQKVKEHLIKLNGSVEQAGDNVKECCKSGSFKVGKMYDIMRAQSSRCSWSRILWKTCARPKDQVIAWMTFHKKLKTKSMLMKRGIIRDDTCQLCQKAPETCHHLFFECEETKIVWRHLLHWIHARRGPLSFGHEIKWFIRRRRGKSILHHLQRCVLITTVAELWHERNIRGFQGKKRDSLIIVRHIQFVCCLLLMSKFGQQAESFLSIM*

Click here to download the sequence:
Link to NCBI Protein BLAST