Transcript Information: S_Transcript_3266.p1


Annotated TAIR IDAT5G63380.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25387581-25390026 | Reverse length=562
E-Value4E-150
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.595360341177
Replicate 236.277741218732
Replicate 328.406764638834
Condition 2: 8 Hour
Replicate 122.470377716711
Replicate 224.098534944135
Replicate 325.536099312008
Condition 3: 24 Hour
Replicate 130.494870913044
Replicate 228.824109353811
Replicate 329.45393105027


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_3266.p1 GENE.S_Transcript_3266~~S_Transcript_3266.p1 ORF type:complete len:298 (+),score=64.65,AMP-binding|PF00501.24|7.5e-55,AMP-binding_C|PF13193.2|4.7e+03,AMP-binding_C|PF13193.2|4.6e-17 S_Transcript_3266:937-1830(+)
ATGCTCTTGAGAGTCGTTTCGTTGGCTGAGACCGTCGTTTTGATGGAACGATTCGATTTCGAGAAGATGTTAGCTGCGATTCAAAAGTACAAGGTTACGTACATGCCGGTTTCACCGCCATTGGTGGTTGCTTTGGAGAAATCGGAGCTTACATATAATTATGATCTGAGTTCCCTTGAAGTTCTTGCTTGTGGTGCTGCTCCTCTCAGTAAAGAGGTTGCTGAGCGCTTTAGACAACGGTTTCCTCATGTGGATATTGTTCAGGGATACGGCTTGACTGAGACTTTAGGTAGGGTTGCAAGTACAGTTGAACCTGAGGAATATGGACAATATGGTTCTGTTGGCCGCCTTTCAGAACATATGGAAGCTAAGATTGTTGATCTATCAACAGGGGAGGCCTTACCACCTGGTCAACAGGGTGAGCTGTGGGTGCGTGGGCCAACCATTATGAAGGGCTATGTGGGAGATGAAGAAGCTACTGCGGCGACAATCCATCCAGATGGATGGTTGAAAACTGGTGATCTGTGTTATTTTGACAATGAGGGGTTCCTTTATATTGTTGATCGGTTAAAGGAATTGATCAAGTACAAGGGATATCAGGTTCCGCCAGCTGAGTTAGAACATGTGCTACTATCCCATCCAGAAATTGCTGATACTGCTGTTATTCCTTACCCTGATGAAGAAGCAGGACAAATACCCATGGGATTTGTTGTCAGGAAACCAGGGAGCATCATTACGGAGTCAGAAGTGATGGAATATGTAGCTAAACAGGTTTCTCCATACAAGAGGATACGACGTGTTTCATTTGTTACCAGTATCCCCAAAAACCCCTCTGGAAAGATCCTTAGGAGAGAGCTTGCAAATCAAGTTATTTCTAGTCCATCCAAGTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_3266.p1 GENE.S_Transcript_3266~~S_Transcript_3266.p1 ORF type:complete len:298 (+),score=64.65,AMP-binding|PF00501.24|7.5e-55,AMP-binding_C|PF13193.2|4.7e+03,AMP-binding_C|PF13193.2|4.6e-17 S_Transcript_3266:937-1830(+)
MLLRVVSLAETVVLMERFDFEKMLAAIQKYKVTYMPVSPPLVVALEKSELTYNYDLSSLEVLACGAAPLSKEVAERFRQRFPHVDIVQGYGLTETLGRVASTVEPEEYGQYGSVGRLSEHMEAKIVDLSTGEALPPGQQGELWVRGPTIMKGYVGDEEATAATIHPDGWLKTGDLCYFDNEGFLYIVDRLKELIKYKGYQVPPAELEHVLLSHPEIADTAVIPYPDEEAGQIPMGFVVRKPGSIITESEVMEYVAKQVSPYKRIRRVSFVTSIPKNPSGKILRRELANQVISSPSKL*

Click here to download the sequence:
Link to NCBI Protein BLAST