Transcript Information: S_Transcript_326706.p1


Annotated TAIR IDAT5G47010.1
Annotated Gene NameRNA helicase, putative
Annotated Gene Symbol(s)UPF1, LBA1, ATUPF1
Annotation TypeOrtholog
Chromosome Positionchr5:19072009-19078856 | Forward length=1254
E-Value2.6E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.49168898109289
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_326706.p1 GENE.S_Transcript_326706~~S_Transcript_326706.p1 ORF type:5prime_partial len:91 (+),score=13.25,AAA_11|PF13086.2|4.5e-08 S_Transcript_326706:2-274(+)
GGGAAAACCGTCACTTCTGCTGCAATTGTGTATCACATGGGTAAACAAGGGCAAGGACAGGTGTTGGTATGTGCACCAAGTAATGTTGCTGTGGATCAACTAGTTGAAAAAATAAGTGCGACTGGCTTGAAGGTAATCCGTGCTTTTTATCTCTCAATTTGGCCAAAGAAAGACAATGTTTGTAGGTATATTGCTTGCAAATATGTCACTGATGTCTCATCATATAATATTATTAGACAAATCTTCTCTGATGTGAATCATCAGACATTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_326706.p1 GENE.S_Transcript_326706~~S_Transcript_326706.p1 ORF type:5prime_partial len:91 (+),score=13.25,AAA_11|PF13086.2|4.5e-08 S_Transcript_326706:2-274(+)
GKTVTSAAIVYHMGKQGQGQVLVCAPSNVAVDQLVEKISATGLKVIRAFYLSIWPKKDNVCRYIACKYVTDVSSYNIIRQIFSDVNHQTL*

Click here to download the sequence:
Link to NCBI Protein BLAST