Transcript Information: S_Transcript_32683.p1


Annotated TAIR IDAT2G40430.2
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687), Tumour suppressor protein Gltscr2 (InterPro:IPR011211); Has 706 Blast hits to 639 proteins in 197 species: Archae - 0; Bacteria - 32; Metazoa - 228; Fungi - 147; Plants - 47; Viruses - 0; Other Eukaryotes - 252 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16879527-16882365 | Reverse length=449
E-Value3.7E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 143.790483850615
Replicate 245.078290482286
Replicate 344.136820672799
Condition 2: 8 Hour
Replicate 134.45989208064
Replicate 231.218897874528
Replicate 330.811088810837
Condition 3: 24 Hour
Replicate 138.327841033497
Replicate 234.150243352542
Replicate 338.864877515156


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_32683.p1 GENE.S_Transcript_32683~~S_Transcript_32683.p1 ORF type:5prime_partial len:440 (+),score=113.76,Nop53|PF07767.7|1.4e+04,Nop53|PF07767.7|2.3e-57 S_Transcript_32683:3-1322(+)
AATGAGTCCAAAACCGCTGGTAGCATAAAAACGGGCCGCAAAAAAGGAATACAAAAAATAAAAAAGAAGAGAGAAAAAAACAAAAAAAGAGGAGGAAAAAAAAAACAAACAAAACGGGCACAAATTGAGAACCCTGGACGGGACTCGGGAGATGGAGTGAACAGAGACATTCATCATCTCCTTGTGCTTCTACTTGAGTCGGCGCCTCTATACTTCGAGAAGAGGAGAAAGATGGGGAAGAAGAGAGCGAAGAAGGTGAAGAAAGCATGGAGAAATATTAGCACTCAAGATATCGACGACTTCAACGCTAAAGTCACTCGTGACGCTCATTCTGGTGGCTCTCTTGCTTCTGCCTCCGACGATTCCCTCTTTGTCCTTGACAAATCCACTGATGTCCCCGTAAAGCGAAAGATTGAGAAGAAAAGGGAGAAAGTGCTTCGCGTTGAAAGTATTCTTCAGAGAAACCCCTTCGTTAAGCCAGTTCCTTCTTCCACCCTTAAGAAGTCCAACAAAAAGGCTAAACAAAGTGCTGAGCTAACTCATCCTCTCAATGATTCTAAAGATAAGGAGTTTAAAGGATCGGAACCTGGCCTCTTTGATATCTGGAGTGATGAAGGCAAAGATAACATCAAAGCCAAGAAGAAAGCTAAACCTTCGGTTATTCCAGCAGTTGAAGTTGAGCCTCCTGGATGCTCTTTTAATCCAGAAAATGAGAGTCACAAGGACTCTTTGGCCCAAGCTGTTGCTGAAGAGATGAAAAAAGTCTATAAAAAAGAGTTGGAGCCTCAACCAATTCCTTTAATTGTTCCTGGAGAAGTGATAACTGAAGAAGATAGATATTTCCTTGAAGTAGACAATGAAGATGAGGATGAGATGGATGATGAAAATCAAACCGAGTATGCAGATCCTGAAGCTGAGAAAAGGACATCCAAAGAAAAGCGGGTGACAAGAGTTGAGCATAATAGAAGAATCAGGCAAAAGGAGCAACTGAAAGCAGAAGCGGAAGCAAAAAAGGTTGAGAATCTTTCGAAGGAAATTGAAAGCATACCGGAAATACTTCGGGAAATAGCCCAAGAAGAGGAGGAAAAGCAGAAAAAACATATCCGTCGCATGATAGCAAAGGAAGAAAGACTCAAATCAGGCCCTCCTCGTTTGGGAAAGCGGAAATTTGAGCCTGCTCCTGTTCAAGTCCTCTTAACTGAAGAAATTACTGGTTCCCTCCTCAAGCTGAAGGCTTGTTGCACGCTAGCAAGGGACCGATTTAAGAGCCTCGAGAAGAGAGGATTGATTGTCCCATCTGCTAAAGGCTGCAAGAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_32683.p1 GENE.S_Transcript_32683~~S_Transcript_32683.p1 ORF type:5prime_partial len:440 (+),score=113.76,Nop53|PF07767.7|1.4e+04,Nop53|PF07767.7|2.3e-57 S_Transcript_32683:3-1322(+)
NESKTAGSIKTGRKKGIQKIKKKREKNKKRGGKKKQTKRAQIENPGRDSGDGVNRDIHHLLVLLLESAPLYFEKRRKMGKKRAKKVKKAWRNISTQDIDDFNAKVTRDAHSGGSLASASDDSLFVLDKSTDVPVKRKIEKKREKVLRVESILQRNPFVKPVPSSTLKKSNKKAKQSAELTHPLNDSKDKEFKGSEPGLFDIWSDEGKDNIKAKKKAKPSVIPAVEVEPPGCSFNPENESHKDSLAQAVAEEMKKVYKKELEPQPIPLIVPGEVITEEDRYFLEVDNEDEDEMDDENQTEYADPEAEKRTSKEKRVTRVEHNRRIRQKEQLKAEAEAKKVENLSKEIESIPEILREIAQEEEEKQKKHIRRMIAKEERLKSGPPRLGKRKFEPAPVQVLLTEEITGSLLKLKACCTLARDRFKSLEKRGLIVPSAKGCKK*

Click here to download the sequence:
Link to NCBI Protein BLAST