Transcript Information: S_Transcript_326840.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41196596339289
Replicate 20.2049175500698
Replicate 30.11419650825759
Condition 2: 8 Hour
Replicate 10.26409152095521
Replicate 20
Replicate 30.32996668119166
Condition 3: 24 Hour
Replicate 10.54104974589707
Replicate 20.14033319861515
Replicate 30.39043412391821


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_326840.p1 GENE.S_Transcript_326840~~S_Transcript_326840.p1 ORF type:internal len:323 (+),score=37.65,PIF1|PF05970.10|1.7e-98,AAA_30|PF13604.2|2.3e-06 S_Transcript_326840:2-967(+)
CCAGGTGTTTTTTTTATTGATGGACCAGGTGGTACTGGCAAGACATTTCTGTATTGTGCTCTATATGCTAAGGTTCGCATGATAGGAAAGATTGTATTACCAACAGCCTCTTCAGGCATAGCTGCATCAAATATCCCAAGTGGCAGAACAACACATTCACAGTTCAAGATACCGTTAGACAGTACTGATTCTATGATTTGTAGTATTCTAAAGCAAAGCGATCTTGCTCAGATTTTAAGGCAAGCTTCACTGATCATCTGGGATGAAGCATCAATGGCAAGAAAGGAAAGTATAGAAGCTGTTGATCGACCGTTACAAGATGTATGTAGCTCCGACTTACCATTTGGTGGAAAAGTTATTATCTTTGGTGGTGATTTCAGACAAGTATTGCCTGTGATTCCCAAACGCACGCAACATGAGTTGGTCGAGCATAGTCTGGTCAGCTCTTATTTGTGGCCATTGTTTACCCAATTCACACTTGCACAAAACATGCGAGCAAGAGAGGATCCAGCTTTCACCGACTTCTTGCTTTGTCTGGGAAATGGAGGCTTTCAAGACTGTGAACAAACAAACATTTTGCTTCCATATAGCTTCTTTTCAGTGGCTCCATCAAATGGTGATTGTCTGCAACAACTTATCGACTCGATCTTCCCAGATTTGGCTGACCTAGCAGCTCATCCATATGCATTTACGTCACGCGCAACACTCACCCCGACAAATGATGAGGTTGATTCTATCAATGAAATGGTTATAGACAAATTCCCAGGCAAAGCATACATTTATAAAAGTTATGACACCACTGTGGATGATGATTGCAATGCTCATCCTGTTGAATTCCTCAACACTCTGTGCCCGGGAGGAATGAGCCTACACCGTCTAACACTAAAAGTCAATTGTCCAGTAATAGTGCTTCGTAATCTCAACCCTTCTGTTGGGCTATGCAATGGAACAAGGCTTATTTGTCGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_326840.p1 GENE.S_Transcript_326840~~S_Transcript_326840.p1 ORF type:internal len:323 (+),score=37.65,PIF1|PF05970.10|1.7e-98,AAA_30|PF13604.2|2.3e-06 S_Transcript_326840:2-967(+)
PGVFFIDGPGGTGKTFLYCALYAKVRMIGKIVLPTASSGIAASNIPSGRTTHSQFKIPLDSTDSMICSILKQSDLAQILRQASLIIWDEASMARKESIEAVDRPLQDVCSSDLPFGGKVIIFGGDFRQVLPVIPKRTQHELVEHSLVSSYLWPLFTQFTLAQNMRAREDPAFTDFLLCLGNGGFQDCEQTNILLPYSFFSVAPSNGDCLQQLIDSIFPDLADLAAHPYAFTSRATLTPTNDEVDSINEMVIDKFPGKAYIYKSYDTTVDDDCNAHPVEFLNTLCPGGMSLHRLTLKVNCPVIVLRNLNPSVGLCNGTRLICR

Click here to download the sequence:
Link to NCBI Protein BLAST