Transcript Information: S_Transcript_326845.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.66856938053075
Replicate 30.18629026347071
Condition 2: 8 Hour
Replicate 10.21540798300134
Replicate 20
Replicate 30.64593477590853
Condition 3: 24 Hour
Replicate 10.44131077758776
Replicate 20.68678216898022
Replicate 30.2547681253042


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_326845.p1 GENE.S_Transcript_326845~~S_Transcript_326845.p1 ORF type:5prime_partial len:99 (+),score=9.07,PIF1|PF05970.10|2.3e-21 S_Transcript_326845:1-297(+)
ACTGCACGAGCAACATTAACTCCAACAAATGATGAAGTTGATTGTATCAACAAGCTTGTAATACACAAATTCCCAGGAGAATCATATATTTTCAAAAGCTATGACAACACCATAGATGATGATTGTAATGCTCATTCGGTTGAATTTCTCAACACACTATGTCCAGGAGGGATGAGTCCCCACAATCTAATACCAAAGCTTAATTGTGCAGTCATTTTGCTTCGAAATCTGAACCCATCTATTGGGTTATGTAATGGGACAAGGCTCATTTGTAGAGGATTAAATGCAATGTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_326845.p1 GENE.S_Transcript_326845~~S_Transcript_326845.p1 ORF type:5prime_partial len:99 (+),score=9.07,PIF1|PF05970.10|2.3e-21 S_Transcript_326845:1-297(+)
TARATLTPTNDEVDCINKLVIHKFPGESYIFKSYDNTIDDDCNAHSVEFLNTLCPGGMSPHNLIPKLNCAVILLRNLNPSIGLCNGTRLICRGLNAML*

Click here to download the sequence:
Link to NCBI Protein BLAST