Transcript Information: S_Transcript_326998.p1


Annotated TAIR IDAT3G05980.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19340.1); Has 202 Blast hits to 202 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 4; Plants - 148; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:1795514-1796251 | Forward length=245
E-Value7.8E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6518414559767
Replicate 21.2172573548974
Replicate 30.38157385000553
Condition 2: 8 Hour
Replicate 10.66182245811792
Replicate 20.38572152827115
Replicate 30.73502922775798
Condition 3: 24 Hour
Replicate 10.22598155335097
Replicate 20.23445322320359
Replicate 30.69578053531355


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_326998.p1 GENE.S_Transcript_326998~~S_Transcript_326998.p1 ORF type:5prime_partial len:290 (+),score=50.52 S_Transcript_326998:2-871(+)
CACCCCCAAAAAAGCATCTCCTCCATCAAAAAAAACTACACTACCTTCTTTAACTCAAAAACCAGAGAGAAAAAACCTCTGATAAAAAAAGATAAGATGGTATCCCCAGAAAGAGCAGAAACAACAACGGCTAGCCCAAGAATATCATTCTCAGCGGATTTTCTCGACGATGAGAGCTTCATTTCCATCAGCCCCAGTTCATCTTTCGACAACGACGAGATCGAACGAGACCCGAAAGATCATCAGTTCGAGTTCCTGTCAACCAAGAACAGCATTGATGGAACAGAGTCAAATATGCTGACTGCCGACGAGCTCTTCTTCGAGGGCAAGCTCCTTCCGTATTGGCAAATGCACCATGCAGCCGACAAGCTCAAAAAAGTCAACCTCAAATCCCAAACAGACGCCGGCGCCGGGAATGGAAAAGATCATCCCCAGCAGGTTTCCCACATTGGGAATGGGATACTTTTGGGCAGGGAACAACAGGAACCAAGGATATGGTTTGTAGATGATGACCCATCACCAAGGCCGCCGAAATGCACGGTTCTATGGAAGGAGTTGCTGAAACTGAAGAAGCACAGGAACTCGACACTGTCACCGTCGTCGTCGTCGTCGAGCTCCAGCTCCAGCTCGAGCTCGTTAGGGGATGCGGCGGCGGCGGAAGCCTCGGTGGAGGAGAGAGAAAAAGATCAGAAGGAGATGAGTAGCAGAGAGAAGCATATTAAGAGGATTAAAAAGGGATTGGAGAGAACAAGATCAGCTAGTATAAGGATTAGGCCTATGGTTAATGTCCCCATTTGTCAAACTACTGGTAAGTCCAGTTCTTTGCCTCCCCTGTTTCCACTCAAGAAAGCCAATAAGCTTGATAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_326998.p1 GENE.S_Transcript_326998~~S_Transcript_326998.p1 ORF type:5prime_partial len:290 (+),score=50.52 S_Transcript_326998:2-871(+)
HPQKSISSIKKNYTTFFNSKTREKKPLIKKDKMVSPERAETTTASPRISFSADFLDDESFISISPSSSFDNDEIERDPKDHQFEFLSTKNSIDGTESNMLTADELFFEGKLLPYWQMHHAADKLKKVNLKSQTDAGAGNGKDHPQQVSHIGNGILLGREQQEPRIWFVDDDPSPRPPKCTVLWKELLKLKKHRNSTLSPSSSSSSSSSSSSSLGDAAAAEASVEEREKDQKEMSSREKHIKRIKKGLERTRSASIRIRPMVNVPICQTTGKSSSLPPLFPLKKANKLDR*

Click here to download the sequence:
Link to NCBI Protein BLAST