Transcript Information: S_Transcript_3270.p1


Annotated TAIR IDAT4G08180.1
Annotated Gene NameOSBP(oxysterol binding protein)-related protein 1C
Annotated Gene Symbol(s)ORP1C
Annotation TypeOrtholog
Chromosome Positionchr4:5169727-5173360 | Forward length=814
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.51874761853
Replicate 217.600959907546
Replicate 314.804528841302
Condition 2: 8 Hour
Replicate 119.473309272221
Replicate 219.152078860312
Replicate 318.803433805387
Condition 3: 24 Hour
Replicate 126.100028289631
Replicate 220.611133852931
Replicate 321.529487035633


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_3270.p1 GENE.S_Transcript_3270~~S_Transcript_3270.p1 ORF type:complete len:806 (+),score=149.32,Oxysterol_BP|PF01237.14|2.7e+03,Oxysterol_BP|PF01237.14|1.8e-124,PH_11|PF15413.2|2.9e+03,PH_11|PF15413.2|1.6e-19,PH_11|PF15413.2|3.1e+03,PH_11|PF15413.2|3.2e+02,PH|PF00169.25|1.1e-11,PH|PF00169.25|1.8e+03,PH|PF00169.25|2e+03 S_Transcript_3270:207-2624(+)
ATGCATCCATTTTGTTGCGTATCCCCAATCTCCGATCGCAACAACGACAACCACCACCCTTCCTTCTCTCCAATGCCGTCTCAACAACCGCCTTACTCGGCGGTTCCCACGGCGGCGCGTCCTCCTCACTCTAACGGCGCCCTTCTTGATCCCAAGCACCGCATCAATATTAATAACAATCATAATTTCAATCAAAATCAAAGTCATAATAATAATAATAATAATCATCATAATCTGAATCAAGTGACGGCGGTGGATCAGAGAGAAGTGAAGATCAACGACTTAGTAGGGAATGGAATTTGTGGAATTCTATACAAGTGGGTGAATTACGGCAAAGGTTGGAGACCTAGATGGTTCGTTTTACAAGATGGAGTGCTTTCTTATTACAAAATTCACGGTCCTGATAAGATCACCCTTAGTTCTGAGACCGAGAAAGGTTCGAAGGTCATCGGCGATGAATCTATGCGCCGAATTCAGCGCCATAAGAATTCTCTTCCTCAGCTTCGCCGGAAGCCCTTCGGTGAAATTCACCTCAAGGTTTCATCAATCCGTGAGAGCAGATCGGATGACAAGAGATTTTCGATCTTCACGGGCACGAAAAGGCTGCATTTGAGAGCCGAGACTCGGGAGGATCGAGCAGCATGGATGGATGCATTGCAAGCAGTTAAGGACATGTTCCCTAGGATGTCCAACAGCGAGTTAATGGCACCTGTCGACAATGCTGTTGTGTCGACAGAGAAGTTGAGGCAACGACTTCTTGAAGAGGGCGTCAGCGAAGCAGCTATTCAGGATAGCGAGCAGATCATGAAGACTGAGTTTGCTACCTTGCAAAACCAACTCGTTTTGCTCAAGCAGAAGCAGTGGCTTCTCATTGATACATTGCGTCAGCTTGAGACAGAGAAAGTAGACTTGGAGAACACAGTTGTTGATGAAAGTCAGAAGATGTCAAAAGAAAAAGGGTCTTCCTCAAGAACAAAGCAAGATAAGTCGAGTGAGGCAAGTCCAAGTGAATCAGATGATGAGAATGATAGGGTTGATGCTGCAGAGGAAGACACAGATGAGGATGAAAACACCTTCTTTGATACACGAGATTTTCTCTCATCAAGTTCCTTTAAAAGCAGTGGGTCTGATTTGAGGATATCATCATTCTCCTCTGATGATGATGACCTTCATGCTGCTGAATCTGAAGATGATCTTGATCCTTCTATCAAGTCTGTAGGGGCTAACTTCCCTTACATTAAACGGCGTAAGAAATTGCCTGATCCTAAAGAAAAGGAGAAAGGTGTTAGTCTTTGGTCAATGATAAAAGACAACATCGGAAAAGATCTGACAAAAGTTTGTCTTCCCGTCTATTTCAATGAACCCATCTCTTCTCTTCAAAAGTGCTTTGAAGAATTGGAGTACTCGTATCTCCTTGATAGAGCGAATGAATGGGGTAAACGGGGGAACAGCCTTATGAGAATCCTTAATGTTGCTGCATTTGCTGTTTCTGGGTATGCCTCTACTGAGGGAAGAAGCTGCAAGCCATTTAACCCATTGTTAGGGGAGACATATGAAGCTGAATATCCTGACAAAGGGCTTCGTTTTTTCTCAGAGAAGGTAAGTCATCACCCGATGATTGTTGCCTGTCACTGTGAGGGGACTGGATGGAAATTATGGGGAGACAGCAATTTGAAAAGCAAATTTTGGGGCCGCTCTATACAACTTGATCCTGTTGGGATTCTTACCTTGGAGTTTGATGATGGAGAAGCGTTCCAGTGGAGTAAGGTGACAACATCAATATACAACCTTATATTAGGAAAGTTATATTGTGAGCACTATGGAACAATGCGTATACAAGGAAATCGGGAGTACTCTTGCAAGCTGAAATTTAAAGAGCAGTCTATTATTGACCGAACTCCTCGTCAGGTACAAGGTATTGTGCAAGATAGGAGTGGGAAAACTGTGGCAACATTATTTGGAAAGTGGGATGAAAGCATGCACTATGTGATTGGGGACTGTTTAGGTAAGGGAAAAGGCTCAGATGCTCTGTCAGAAGCACGTCCATTGTGGAGGCGAAGCAAGCCGCCAAAGTTCCCTACCAGATACAATTTAACACGCTTTGCTATCACATTGAATGAGCTAACACCTGGATTACAGGACAAGTTGCCACCTACAGATTCAAGGCTGAGACCTGATCAAAGGTTCCTGGAAAATGGAGAGTACGATAAGGCAAATGCAGAGAAGCTGCGGCTGGAGCAAAGGCAACGGCAGGCTCGGAAAATGCAAGAAAGGGGGTGGAAGCCACAATGGTTTGTAAAGGACAAGGAAACAGATGCATATCAGTACACTGGAGGGTACTGGGAGTCCCGAGAGCAGGGGAAGTGGGAATCATGCCCTGACATCTTTGGGCAAGTCCCAGCCGAGATATTGGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_3270.p1 GENE.S_Transcript_3270~~S_Transcript_3270.p1 ORF type:complete len:806 (+),score=149.32,Oxysterol_BP|PF01237.14|2.7e+03,Oxysterol_BP|PF01237.14|1.8e-124,PH_11|PF15413.2|2.9e+03,PH_11|PF15413.2|1.6e-19,PH_11|PF15413.2|3.1e+03,PH_11|PF15413.2|3.2e+02,PH|PF00169.25|1.1e-11,PH|PF00169.25|1.8e+03,PH|PF00169.25|2e+03 S_Transcript_3270:207-2624(+)
MHPFCCVSPISDRNNDNHHPSFSPMPSQQPPYSAVPTAARPPHSNGALLDPKHRININNNHNFNQNQSHNNNNNNHHNLNQVTAVDQREVKINDLVGNGICGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKITLSSETEKGSKVIGDESMRRIQRHKNSLPQLRRKPFGEIHLKVSSIRESRSDDKRFSIFTGTKRLHLRAETREDRAAWMDALQAVKDMFPRMSNSELMAPVDNAVVSTEKLRQRLLEEGVSEAAIQDSEQIMKTEFATLQNQLVLLKQKQWLLIDTLRQLETEKVDLENTVVDESQKMSKEKGSSSRTKQDKSSEASPSESDDENDRVDAAEEDTDEDENTFFDTRDFLSSSSFKSSGSDLRISSFSSDDDDLHAAESEDDLDPSIKSVGANFPYIKRRKKLPDPKEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPISSLQKCFEELEYSYLLDRANEWGKRGNSLMRILNVAAFAVSGYASTEGRSCKPFNPLLGETYEAEYPDKGLRFFSEKVSHHPMIVACHCEGTGWKLWGDSNLKSKFWGRSIQLDPVGILTLEFDDGEAFQWSKVTTSIYNLILGKLYCEHYGTMRIQGNREYSCKLKFKEQSIIDRTPRQVQGIVQDRSGKTVATLFGKWDESMHYVIGDCLGKGKGSDALSEARPLWRRSKPPKFPTRYNLTRFAITLNELTPGLQDKLPPTDSRLRPDQRFLENGEYDKANAEKLRLEQRQRQARKMQERGWKPQWFVKDKETDAYQYTGGYWESREQGKWESCPDIFGQVPAEILD*

Click here to download the sequence:
Link to NCBI Protein BLAST