Transcript Information: S_Transcript_327989.p1


Annotated TAIR IDAT3G50420.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18710871-18713649 | Reverse length=794
E-Value1.3E-239
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14703315599547
Replicate 20.21331426367763
Replicate 30.35662749332929
Condition 2: 8 Hour
Replicate 10.97201364705164
Replicate 21.1124123633013
Replicate 31.1482293599368
Condition 3: 24 Hour
Replicate 10.18103494605465
Replicate 20.43825050009512
Replicate 30.31353370116857


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_327989.p1 GENE.S_Transcript_327989~~S_Transcript_327989.p1 ORF type:complete len:724 (+),score=102.82,PPR_2|PF13041.2|6.9e+02,PPR_2|PF13041.2|0.00076,PPR_2|PF13041.2|37,PPR_2|PF13041.2|7.8e-09,PPR_2|PF13041.2|11,PPR_2|PF13041.2|5.9e-08,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|0.00033,PPR_2|PF13041.2|39,PPR_2|PF13041.2|4.9e-10,PPR_2|PF13041.2|1.7e-06,PPR_2|PF13041.2|35,PPR_2|PF13041.2|3.9e+03,PPR|PF01535.16|16,PPR|PF01535.16|6.4,PPR|PF01535.16|4.5e+03,PPR|PF01535.16|7.2,PPR|PF01535.16|0.028,PPR|PF01535.16|7.8,PPR|PF01535.16|0.52,PPR|PF01535.16|0.0003,PPR|PF01535.16|52,PPR|PF01535.16|3.3e+03,PPR|PF01535.16|0.0014,PPR|PF01535.16|1.1,PPR|PF01535.16|2.2e-06,PPR|PF01535.16|0.00019,PPR|PF01535.16|0.076,PPR|PF01535.16|70,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|0.0064,PPR_3|PF13812.2|8.7e+02,PPR_3|PF13812.2|2.4e+03,PPR_3|PF13812.2|42,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|53,PPR_3|PF13812.2|5.5,PPR_3|PF13812.2|15,PPR_3|PF13812.2|14,PPR_3|PF13812.2|0.015,PPR_3|PF13812.2|11,PPR_3|PF13812.2|4.2e+02,PPR_1|PF12854.3|0.45,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|6.2e+02,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|5.8,PPR_1|PF12854.3|77,PPR_1|PF12854.3|0.54,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|30,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|4.3,PPR_1|PF12854.3|3.4 S_Transcript_327989:465-2636(+)
ATGCCATCCACAACCGAAGTTTATTCACTAACAAACTTCCTTATACAAAAATGCAACGCCATAACCTCCCTCAAGAAAGCCCGCCAACTCCATGCCCACATCCTTACCTCCTCATCTCCCACCACTTATCAAACACCATTCCTCCACAACAACATCCTCACCATGTATGTAAACTGCGGTTCACTGTTCCATTCCCACCTAGTGTTCGACAAAATGCCTCAAAGAAACATTATTTCTTACAACTCGCTCATTGCAGCCTATGCCCGTCGTCCCAACACCGCCCCTTGTGCGTTTCAACTGCTTGCTCAGATGAGATATGAATGTTTTCGACCAAACGGGCCGACCTTCACCAGCTTATTGCAAACAGCTACCGGAACTGGGGACTATATTACAGGCTTTGCTCTTCATTGTCAAATTGTGAAGTTTGGACTTTTGTTTGATGTGTGTGTTCAAACTGCATTGATTGGTCTTTATAGTAATCTTGGGGATCTTAATTCAGCTAATGAAGTATTTAGAAGTGTACATGTCAAAGATGACATTGCCTGGAATTGTATCATATCAGGGAACTTGAAGAACAACATGATGAGAGAAGGGCTGTGTCATTTCAAGATGATGTTGATGAGCAATGTCAGACCAACCGAGTTCACCTATTCCATTGTACTGAATGCTTGTGCTAGATTGGGTTTTTATTCTTTTGGTCAGCTTACTCACACACAAGTTATGAAAACTGGTGCATATGTAGATTTGCCCTTCCAAAATTCGCTGGTCGACATGTACTCGAGCTGTGGTGATACCCAATCAGCATGTCATGTTTTTAATGAAATTCAGAATCCTGATCTTGTGTCGTGGAACTCGATGATGGCAGGGTATGCAGAGAATCGAGAGGGGGAGAAAGCCATCGATTTTTTTGTCCAACTGCAGCATCAGTCTGCGCAAAAACCAGATGAATATACTTTTGCAGCTGTGATCTCTGCCATTAAAGAACACCCAGCTTCACAATATGGGCAACCACTCCATGCACAAGTCATAACATCTGGATTGGATCAGAGCGTTTTTATTGGGAGTCCACTAATTTCCATGTATTTTGAAAATGAGGGAACTGAAATGGCTGAAGGGGTTTTCAGCTCGATCATTAAGAAAGACGTGGTTCTGTGGACTGAAATGGCTGAAGGGGTTTTCAGCTCGATCATTAAGAAAGACGTGGTTCTGTGGACTGAAATGATCACAGGTTATTCTAAAACATTGGATGGTGAAAATGCACTTAAATTCTTCTATATGATGTTGAAAGAAGGCCATAAAGTTGACAGCTTTGCTCTAAGTAGTTCTTTGAGTGTGTGCGCGGATCTTGCAACCTTGAAACAAGGTGAAATGCTTCAATGTCAGACCATTAAAACTGGGTATGATACAGATATGTCAGTCTGTGGTAGTTTGATCGATACATATTCCAAAAATGGTAATCTACAAGCTGCCAAGTTGATATTTGCTGACGTCACAGACCCTGATTTGAAGTGCTGGAACTCAATGATTGGAGGATATAGTCACCATGGAATGGCAGAGGAATCAATTAAACTCTTTGATGAGATTTTAGTTTCTCGTCTGGAACCAGATCAAGTGACATATATTTCACTGCTTTCAGCTTGTAGTCATTGTGGTTTAGTTGAGAGAGGGAAGTACTTGTGGAATTCTATGAAACAAAAGGGCATAACTCCTGGGTTTAAGCACTATTCTTGCATGGTGAGTCTGCTAAGTCGAGCAGGGTTGCTAGAAGACGCTATGGCAATTATAAATGAGTCACCGTTCAGTAAGAATTGTCTTGAACTGTGGAGGACTGTGTTAAGTTCATCTGTTTCTAGTAGAAACTTAGCTGCAGGACTAAATGCAGCTGGGAAAATATTACAAGTGAATGATCGGGACAGTGCAACACATTCCTTGCTTTTGAATCTATATGCTGCTGTGGGTAGATGGGACGGCGTTGTGGAAACAAGGAAGAGGATAAGAGGACTGATGTTGGAAAAGGATCCAGGATTGAGCTGGGTTGAGACTGGCAAGAGCTTGGATGTTTTTTCATCCGCTGATCAGTCTCACTCAAGGATTGAAGAAGTCAAAGCTCAGCTTCAGGCCCTGCAAGGGAACATGACATTAGGGCATGTTATTGATGATGTATGGTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_327989.p1 GENE.S_Transcript_327989~~S_Transcript_327989.p1 ORF type:complete len:724 (+),score=102.82,PPR_2|PF13041.2|6.9e+02,PPR_2|PF13041.2|0.00076,PPR_2|PF13041.2|37,PPR_2|PF13041.2|7.8e-09,PPR_2|PF13041.2|11,PPR_2|PF13041.2|5.9e-08,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|0.00033,PPR_2|PF13041.2|39,PPR_2|PF13041.2|4.9e-10,PPR_2|PF13041.2|1.7e-06,PPR_2|PF13041.2|35,PPR_2|PF13041.2|3.9e+03,PPR|PF01535.16|16,PPR|PF01535.16|6.4,PPR|PF01535.16|4.5e+03,PPR|PF01535.16|7.2,PPR|PF01535.16|0.028,PPR|PF01535.16|7.8,PPR|PF01535.16|0.52,PPR|PF01535.16|0.0003,PPR|PF01535.16|52,PPR|PF01535.16|3.3e+03,PPR|PF01535.16|0.0014,PPR|PF01535.16|1.1,PPR|PF01535.16|2.2e-06,PPR|PF01535.16|0.00019,PPR|PF01535.16|0.076,PPR|PF01535.16|70,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|0.0064,PPR_3|PF13812.2|8.7e+02,PPR_3|PF13812.2|2.4e+03,PPR_3|PF13812.2|42,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|53,PPR_3|PF13812.2|5.5,PPR_3|PF13812.2|15,PPR_3|PF13812.2|14,PPR_3|PF13812.2|0.015,PPR_3|PF13812.2|11,PPR_3|PF13812.2|4.2e+02,PPR_1|PF12854.3|0.45,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|6.2e+02,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|5.8,PPR_1|PF12854.3|77,PPR_1|PF12854.3|0.54,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|30,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|4.3,PPR_1|PF12854.3|3.4 S_Transcript_327989:465-2636(+)
MPSTTEVYSLTNFLIQKCNAITSLKKARQLHAHILTSSSPTTYQTPFLHNNILTMYVNCGSLFHSHLVFDKMPQRNIISYNSLIAAYARRPNTAPCAFQLLAQMRYECFRPNGPTFTSLLQTATGTGDYITGFALHCQIVKFGLLFDVCVQTALIGLYSNLGDLNSANEVFRSVHVKDDIAWNCIISGNLKNNMMREGLCHFKMMLMSNVRPTEFTYSIVLNACARLGFYSFGQLTHTQVMKTGAYVDLPFQNSLVDMYSSCGDTQSACHVFNEIQNPDLVSWNSMMAGYAENREGEKAIDFFVQLQHQSAQKPDEYTFAAVISAIKEHPASQYGQPLHAQVITSGLDQSVFIGSPLISMYFENEGTEMAEGVFSSIIKKDVVLWTEMAEGVFSSIIKKDVVLWTEMITGYSKTLDGENALKFFYMMLKEGHKVDSFALSSSLSVCADLATLKQGEMLQCQTIKTGYDTDMSVCGSLIDTYSKNGNLQAAKLIFADVTDPDLKCWNSMIGGYSHHGMAEESIKLFDEILVSRLEPDQVTYISLLSACSHCGLVERGKYLWNSMKQKGITPGFKHYSCMVSLLSRAGLLEDAMAIINESPFSKNCLELWRTVLSSSVSSRNLAAGLNAAGKILQVNDRDSATHSLLLNLYAAVGRWDGVVETRKRIRGLMLEKDPGLSWVETGKSLDVFSSADQSHSRIEEVKAQLQALQGNMTLGHVIDDVWY*

Click here to download the sequence:
Link to NCBI Protein BLAST