Transcript Information: S_Transcript_328363.p1


Annotated TAIR IDAT5G49480.1
Annotated Gene NameCa2+-binding protein 1
Annotated Gene Symbol(s)ATCP1, CP1
Annotation TypeHomolog
Chromosome Positionchr5:20070812-20071294 | Forward length=160
E-Value6E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6728172204971
Replicate 21.0085846654864
Replicate 30.42154825333944
Condition 2: 8 Hour
Replicate 10.85301561268532
Replicate 20.12783913508415
Replicate 30.60902421728518
Condition 3: 24 Hour
Replicate 11.1234511509448
Replicate 21.2950749472198
Replicate 30.86475580817541


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_328363.p1 GENE.S_Transcript_328363~~S_Transcript_328363.p1 ORF type:complete len:175 (-),score=25.03,EF-hand_1|PF00036.28|2.6e-06,EF-hand_1|PF00036.28|5.6e-06,EF-hand_1|PF00036.28|7.3e-05,EF-hand_1|PF00036.28|9.6e+03,EF-hand_7|PF13499.2|3.7e-11,EF-hand_7|PF13499.2|4.3e-05,EF-hand_6|PF13405.2|1.4e-05,EF-hand_6|PF13405.2|5.4e+02,EF-hand_6|PF13405.2|0.0093,EF-hand_6|PF13405.2|0.00015,EF-hand_5|PF13202.2|0.00013,EF-hand_5|PF13202.2|0.00027,EF-hand_5|PF13202.2|0.00045,EF-hand_8|PF13833.2|3.6e-07,EF-hand_8|PF13833.2|0.0011,EF-hand_8|PF13833.2|0.57 S_Transcript_328363:1-525(-)
ATGTGTCCAACGGGATCAAACATACGCCCATTGACACCCAGCGACGCCACGTCAGAATACCGGCGAGCATTCGAGGTGATCGACGGCGACCACGACGGAAAGATCAGCGGCGATGATCTGAGATCCTTCATGGCGTCGATCTCCGGCGACATCCAAGAGGAGGAAATGATAAAGGCGATGATTTCCCTCGCCGATGCGAATAAGGACGGGTTTGTTCAATACGACGAGTTTGAGCGCGTTTTGAAGCAGAGGAAAGGGAGAAATGGGAAGGAGAAGGTGAATGGTTACGGCGACGGTGGGGTGATGGAAGATGTGTTTAGGGTGATGGATCAGGACGGTGACGGGCGGTTGGGATTAGAGGATTTGAAAAGTTATTTGGGTCGGGCTGGGATTAAGGTTGGGGATGAGGAGATTCAGGCTATGATTAAGTTGGGTGGTGGAGATGGAGAGAGGGGGTTTCTTTTGATGGGTTCGTTAATATCTTGGCTGTTCATGATTTGGTCGGCTAAGGCAGCTTTTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_328363.p1 GENE.S_Transcript_328363~~S_Transcript_328363.p1 ORF type:complete len:175 (-),score=25.03,EF-hand_1|PF00036.28|2.6e-06,EF-hand_1|PF00036.28|5.6e-06,EF-hand_1|PF00036.28|7.3e-05,EF-hand_1|PF00036.28|9.6e+03,EF-hand_7|PF13499.2|3.7e-11,EF-hand_7|PF13499.2|4.3e-05,EF-hand_6|PF13405.2|1.4e-05,EF-hand_6|PF13405.2|5.4e+02,EF-hand_6|PF13405.2|0.0093,EF-hand_6|PF13405.2|0.00015,EF-hand_5|PF13202.2|0.00013,EF-hand_5|PF13202.2|0.00027,EF-hand_5|PF13202.2|0.00045,EF-hand_8|PF13833.2|3.6e-07,EF-hand_8|PF13833.2|0.0011,EF-hand_8|PF13833.2|0.57 S_Transcript_328363:1-525(-)
MCPTGSNIRPLTPSDATSEYRRAFEVIDGDHDGKISGDDLRSFMASISGDIQEEEMIKAMISLADANKDGFVQYDEFERVLKQRKGRNGKEKVNGYGDGGVMEDVFRVMDQDGDGRLGLEDLKSYLGRAGIKVGDEEIQAMIKLGGGDGERGFLLMGSLISWLFMIWSAKAAFL*

Click here to download the sequence:
Link to NCBI Protein BLAST