Transcript Information: S_Transcript_328736.p1


Annotated TAIR IDAT1G78570.1
Annotated Gene Namerhamnose biosynthesis 1
Annotated Gene Symbol(s)RHM1, ROL1, ATRHM1
Annotation TypeOrtholog
Chromosome Positionchr1:29550110-29552207 | Forward length=669
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2962192382432
Replicate 20.77236554006521
Replicate 30.67370725419545
Condition 2: 8 Hour
Replicate 10.12983494865834
Replicate 20.17025759999792
Replicate 30.55155161230545
Condition 3: 24 Hour
Replicate 11.6624721073511
Replicate 21.103869056991
Replicate 31.4971989829521


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_328736.p1 GENE.S_Transcript_328736~~S_Transcript_328736.p1 ORF type:complete len:657 (+),score=101.56,GDP_Man_Dehyd|PF16363.1|6.6e-63,GDP_Man_Dehyd|PF16363.1|0.00075,Epimerase|PF01370.17|2.2e-45,Epimerase|PF01370.17|1.5e-10,RmlD_sub_bind|PF04321.13|1.1e-11,RmlD_sub_bind|PF04321.13|6.8e-12,Polysacc_synt_2|PF02719.11|1.6e-15,Polysacc_synt_2|PF02719.11|0.00032,3Beta_HSD|PF01073.15|3.5e-16,3Beta_HSD|PF01073.15|1.3,NAD_binding_4|PF07993.8|1e-14,NAD_binding_4|PF07993.8|1.2 S_Transcript_328736:193-2163(+)
ATGTTGTCAACAAACTTGTCAGAAACAATCCTGACTATAAGATTGTGGTCCTGGACAAAGCTCGACTACTGCTCGAACCTCAAAAACTTGAACCCCTCTCGATTCTCCCCCAACTTTAAGTTCATCAAGGGTGACATTAGAAGCGCTGATTTGGTGAATTACATCCTGAGAACCGAAGCCATTGACACCATCATGCACTTTGCTGCACAGACTCATGTTGACAACTCCTTTGGCAACAGCTTCGAGTTCACTAAGAACAACATTTATGGGACCCATGTTCTCCTTGAGGCGTGCAAGGGGATGGCCCCACAGATCAAGAGGTTTGTCCATGTCAGCACTGACGAGGTCTATGGAGAGACCGAAGTGGAGGCTATGGTGGGCAATCATGAGGCGTCTCAGCTCCTTCCTACCAACCCTTACTCTGCCAGCAAAGCAGGGGCCGAAATGCTCGTCATGGCATATGGTAGGTCATACGGGCTTCCAGTTATAACGACAAGGGGGAACAACGTGTATGGGCCCAACCAATTTCCTGAGAAGCTGATTCCCAAGTTCATACTCCTAGCCATGAGAGGGATGCCTCTTCCGATCCATGGGGATGGATCGAATGTGAGGAGTTACTTGTATTGTGAGGATGTGGCTGAGGCATTTGAGATTATCCTCCACAAAGGAGAAGTTGGGCATGTCTACAACATTGGAACCGAGAAGGAGAGGAAGGTCCTTGATGTGGCTAAAAACATTTGCTCCATGTTTTCAAGGAACCCAGATCAAGTTATCGAGTTTGTTGAAAATAGACCTTTCAATGATCAAAGATACTTCTTAGATCACCAGAAGCTGAAGGAAATAGGTTGGTCTGAGAGAACTAGTTGGGAAGAGGGTCTGAGAAAAACCAAGGAATGGTATGTCAGAAATCCTGATTGGTGGGGAGATATATCAGGAGCCTTAGTCCCTCACCCTAGGATGCTAATGATGCCCGATGATACAAATCTACGTGTCAATGGAAACGAATCCCATGAGCCTCTTAGCAACCACAACGACAACACAAACCCAGTTCATATGGTGGTGGTACAAACCTCGAAAATTGATGCACCTACCGAGAGCCCTTCATTGAAGTTCCTGATCTATGGTAAAACAGGGTGGATCGGAGGTCTTCTTGGAAAACTCTGCGAAAAGCAGGGCATACCATACGAGTATGGAAGAGGGCGAATAGAGGACAGACGCCAAATCTTCGCTGACATACAAAGTGTTCAGCCGACCCATGTCTTCAATGCCGCTGGTGTGACTGGGAGGCCTAATGTGGATTGGTGTGAATCACATATGACAGAAACAATTTGGACTAATGTTCTTGGGACTTTAACGTTGGCTGGTGTTTGTAGAGAACATAGGGTTTTGTTGGTGAACTATGCGACAGGGTGCATTTTCGAGTACGATGATGCCCACCCCATTGGCTCTGGCATTGGGTTCAATGAGGAAGACGAGCCCAACTTTAATGGCTCTTTCTATTCAAAAACCAAAGCCATGGTTGAAGAGCTCTTGAAGGAGTATGAAAATATTTGCACCTTGAGACTACGGATGCCAATATCATCAGACCTCGGCAACCATAGAAATTTCGTCAATAAAATAACAAGTTACAACAAGGTGGTGAATGTTCCGAATAGCATGACCATTTTAGATGAGCTCTTGCCCATCTCGATTGAAATGGCAAAGAGAAACTTGACGGGTATATGGAACTTCACAAACCCAGGAGTTGTGAGCCACAATGAGATACTAGAGATGTACAAGAAGTACATAGACCCTGACTTCAAATGGGTCAACTTCACTTTGGAGGAGCAACCAAAGGTCATTGTTGCCCCTCGGAGCAACAATGAGCTTGATGCTACGAAGCTGAAGAACGAGTTCCCAGATATTTTGCCAATCAAGGAGTCCCTTATCAAGTATGTGTTTGAACCCAACAAGAGGACTTCAGAAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_328736.p1 GENE.S_Transcript_328736~~S_Transcript_328736.p1 ORF type:complete len:657 (+),score=101.56,GDP_Man_Dehyd|PF16363.1|6.6e-63,GDP_Man_Dehyd|PF16363.1|0.00075,Epimerase|PF01370.17|2.2e-45,Epimerase|PF01370.17|1.5e-10,RmlD_sub_bind|PF04321.13|1.1e-11,RmlD_sub_bind|PF04321.13|6.8e-12,Polysacc_synt_2|PF02719.11|1.6e-15,Polysacc_synt_2|PF02719.11|0.00032,3Beta_HSD|PF01073.15|3.5e-16,3Beta_HSD|PF01073.15|1.3,NAD_binding_4|PF07993.8|1e-14,NAD_binding_4|PF07993.8|1.2 S_Transcript_328736:193-2163(+)
MLSTNLSETILTIRLWSWTKLDYCSNLKNLNPSRFSPNFKFIKGDIRSADLVNYILRTEAIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKGMAPQIKRFVHVSTDEVYGETEVEAMVGNHEASQLLPTNPYSASKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGMPLPIHGDGSNVRSYLYCEDVAEAFEIILHKGEVGHVYNIGTEKERKVLDVAKNICSMFSRNPDQVIEFVENRPFNDQRYFLDHQKLKEIGWSERTSWEEGLRKTKEWYVRNPDWWGDISGALVPHPRMLMMPDDTNLRVNGNESHEPLSNHNDNTNPVHMVVVQTSKIDAPTESPSLKFLIYGKTGWIGGLLGKLCEKQGIPYEYGRGRIEDRRQIFADIQSVQPTHVFNAAGVTGRPNVDWCESHMTETIWTNVLGTLTLAGVCREHRVLLVNYATGCIFEYDDAHPIGSGIGFNEEDEPNFNGSFYSKTKAMVEELLKEYENICTLRLRMPISSDLGNHRNFVNKITSYNKVVNVPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKKYIDPDFKWVNFTLEEQPKVIVAPRSNNELDATKLKNEFPDILPIKESLIKYVFEPNKRTSEV*

Click here to download the sequence:
Link to NCBI Protein BLAST