Transcript Information: S_Transcript_328818.p1


Annotated TAIR IDAT4G36630.1
Annotated Gene NameVacuolar sorting protein 39
Annotated Gene Symbol(s)EMB2754
Annotation TypeOrtholog
Chromosome Positionchr4:17272088-17276524 | Reverse length=1000
E-Value2.8E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.54872167495218
Replicate 21.0235314743177
Replicate 30.38026259966187
Condition 2: 8 Hour
Replicate 10.54962346178178
Replicate 20.92255045937017
Replicate 30.5493775155923
Condition 3: 24 Hour
Replicate 11.2386274144151
Replicate 20.4672950840484
Replicate 30.2600210763414


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_328818.p1 GENE.S_Transcript_328818~~S_Transcript_328818.p1 ORF type:internal len:194 (+),score=39.75,Vps39_1|PF10366.5|3.1e-26,Clathrin|PF00637.16|1.2e-06 S_Transcript_328818:3-581(+)
GCCCTTATTAAGTTCTTGCAGAAGAAAAGATTTAACATTATTGAAAAGGCAGCAGCAGAAGGAACAGATGAGGCTGTTTTTGATGCTATTGGTGCTAACTTTATATCTTTCAACTCCCATGGGGCCAAAAAATCAAATAAGGGTCGTGGTAGCATCCCCATAAGTTCAGGTGGTCGTGAGAGAGCTGCTATACTGGACACTGCTCTTATCCAAGCTCTCATTCTTACAGGGCAGTCTTCTGCTGCCGTGGAATTATTGAAAGGTCTTAACTACTGTGACTTGAAAATATCTGAGGAGTTCTTGCAGAAAAGAAATCATTATACTGCGTTGCTGGAATTATACAAGTGCAACACTATGCACCATGAAGCTTTAAAGCTTTTGCTCCAATTAGTAGAAGACTCAAAGTCAAACCACCCACGTGCCGAGCTTCCCCAGAAGTTCACACCTGAAATGATTGTTGACTATCTAAAGCCTCTTTGTGCTATGGACCCAATGCTTGTGCTGGAATATGCAATGCTTATTCTTGAAAGCTGTCCGACACAAACTATTGAACTATTTCTGTCGGGAAACATTTCAGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_328818.p1 GENE.S_Transcript_328818~~S_Transcript_328818.p1 ORF type:internal len:194 (+),score=39.75,Vps39_1|PF10366.5|3.1e-26,Clathrin|PF00637.16|1.2e-06 S_Transcript_328818:3-581(+)
ALIKFLQKKRFNIIEKAAAEGTDEAVFDAIGANFISFNSHGAKKSNKGRGSIPISSGGRERAAILDTALIQALILTGQSSAAVELLKGLNYCDLKISEEFLQKRNHYTALLELYKCNTMHHEALKLLLQLVEDSKSNHPRAELPQKFTPEMIVDYLKPLCAMDPMLVLEYAMLILESCPTQTIELFLSGNISA

Click here to download the sequence:
Link to NCBI Protein BLAST