Transcript Information: S_Transcript_328920.p1


Annotated TAIR IDAT1G54520.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1517 (InterPro:IPR010903); Has 276 Blast hits to 275 proteins in 83 species: Archae - 0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20363565-20365874 | Forward length=391
E-Value2E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.89862082092817
Replicate 20.57305946902636
Replicate 30.14370963182026
Condition 2: 8 Hour
Replicate 10.11078124840069
Replicate 20
Replicate 30.16609751380505
Condition 3: 24 Hour
Replicate 10
Replicate 20.76527155972082
Replicate 30.1310236072993


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_328920.p1 GENE.S_Transcript_328920~~S_Transcript_328920.p1 ORF type:5prime_partial len:385 (+),score=-12.59,DUF1517|PF07466.7|6.3e-79 S_Transcript_328920:3-1157(+)
CCCACATTGCATCGTACATGTGCTCATAGACAGCGCGCCCAGGCCGTGCCAAGGCTCGCACGATACAGCGCCCGGGCGCAAAGCAAAGCGCAAGAGCCAGCCGCGGAGGTTGTTGCAGCTGAGGTCGTCACGCAACAGCCGACCCTCATGTCGCGCGTCCGCGAATTCTGCAGTAGCACGGTTGGCAAGTATGTTGCGGCGGTAGCATTAGCAGCTGTTCTGGTGTTTTCTTCACCAGGCATGGCCGAAGCTGCACGTAGTGGCGGCAGAATGGGTGGCAGCGGCTTCAGCAGCAGGGGCGGCATGGCAGGCAGCTCCCTCGGCTCTGGCTTTTCAGGCCGCTCCTCGGGTTACTCAATGCGCAGCGCGCCCGCGCCCAGCATTCACCGCTCCCACACATTCATCTCGCCCGGCCCCACCGTTGGCTACTTTGGGGGCTTTGGCTACGGCGGCCCGATGGTGTATGGCGGCGGCGGCATCGGCGGCGGCGGCTCTGCCCTGTTCTCGTTCCTCCTCGTCGGCATTTTTGCCTACGTGATTTTCAATAGCTTCTTCGCCGGCAGCACGGAGTACGATGACGACTATGTAGATGCTGACAGCGAGCCAATGTCTGTGGTGAAGATCCAAGTCGCGCTGCTGGGCACCGCCCGCGGCTTGCAACAAGACCTCAACCGCATGGCCAACAAGCTGGACACCTCCACATCGCAGGGCCTGCACTACCTGCTGCAGGAGACGGTGCTGACGCTGCAGCGCAACCCGCAGTATGCTGTGTATGGCAAGTCGGAGCTGCAAAAGACACGGGGCCTCGACAATGCTGAGAACAAGTTCAACCAGGCGAGCATGTCGGAGCGCGGCAAGATCCAGCAGGAGACGCTGAGCAACTACGGCGGCACGCGCAACCAAGGCAGCTACCGCACGACGGGCGATGGCATGAACGAACTCATCGTCGTGACGCTCATCGCGGCGGTGGAGGGCAAGGTGACGCCGTCGCCGATCACAGACACGCAGGGCCTGAAGGAGAACCTGAGCCTGCTGGGCAGCGTGCCCGCGGACCGGCTGCTCGCGCTCGAGGTGCTGTGGACGCCGCAGGATGAGAACGACTACTTCACGCGTGACGAGCTCGTCTCCGACTACCCCGACCTCAACATGCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_328920.p1 GENE.S_Transcript_328920~~S_Transcript_328920.p1 ORF type:5prime_partial len:385 (+),score=-12.59,DUF1517|PF07466.7|6.3e-79 S_Transcript_328920:3-1157(+)
PTLHRTCAHRQRAQAVPRLARYSARAQSKAQEPAAEVVAAEVVTQQPTLMSRVREFCSSTVGKYVAAVALAAVLVFSSPGMAEAARSGGRMGGSGFSSRGGMAGSSLGSGFSGRSSGYSMRSAPAPSIHRSHTFISPGPTVGYFGGFGYGGPMVYGGGGIGGGGSALFSFLLVGIFAYVIFNSFFAGSTEYDDDYVDADSEPMSVVKIQVALLGTARGLQQDLNRMANKLDTSTSQGLHYLLQETVLTLQRNPQYAVYGKSELQKTRGLDNAENKFNQASMSERGKIQQETLSNYGGTRNQGSYRTTGDGMNELIVVTLIAAVEGKVTPSPITDTQGLKENLSLLGSVPADRLLALEVLWTPQDENDYFTRDELVSDYPDLNML*

Click here to download the sequence:
Link to NCBI Protein BLAST