Transcript Information: S_Transcript_328999.p1


Annotated TAIR IDAT3G05200.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)ATL6
Annotation TypeOrtholog
Chromosome Positionchr3:1477377-1478573 | Forward length=398
E-Value7.2E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9621795027899
Replicate 27.0097661323265
Replicate 36.6108381888263
Condition 2: 8 Hour
Replicate 15.646233688854
Replicate 26.5156300518959
Replicate 36.6422091314911
Condition 3: 24 Hour
Replicate 19.2540443300277
Replicate 27.2468806873453
Replicate 36.626565638004


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_328999.p1 GENE.S_Transcript_328999~~S_Transcript_328999.p1 ORF type:5prime_partial len:491 (+),score=9.61,zf-RING_2|PF13639.2|4.7e-14,zf-RING_11|PF17123.1|1.1e-10,zf-RING_11|PF17123.1|8.1e+03,zf-rbx1|PF12678.3|2.5e-08,zf-C3HC4|PF00097.21|1.9e-06,zf-C3HC4_2|PF13923.2|1.2e-05 S_Transcript_328999:1-1473(+)
ATACTGAATCAATCCTACGATTATAATTGTTCTCCTTCTCCCATAGAAGAAAGTCATGGATGGACCCCGCTACTCCACCTATCCCCTGAAGTCAGAATACTAGACTTCTTCTTCCTTCCACCATCGTCCCTTAAATTCTCTCTCTTTTATCATCTCCTCCTCTTCACTCATTTCCTTTCCTTTATATGCCCCTTTTACTCCTCTCTTCTCCATTCTCTCAGATGCCTTTTCAGGCGCCACTCCCTTCCATTTTCCAAAACCCATAAAACCCCAAAACACAAAAAGAAACAATTAAAAGTTTCCACGATGATCCGCCATGTCATCATCCTCATCTTACTCGTCCACCAAACCCGACCCGCATCCGCCTCCGACCCGCCCGGCCCACCATCCGGACCTGACAACAATCTCGGAAACCAGAACTTCAACCCGTCAATGGGGGTAGTCATCATAGTCCTCATAGCGGCCCTCTTCTTCATGGGCTTCTTCTCCATCTACATTCGCCACTGCTCCGACGGCCCCGCATCGGGCTGGAGCGGATCTTTTCGGGCCAGAGTCGGGTCGGTGGGCCGGTCACGTCGGGCCCCGCGCGGGCTGGACCCTGGGGTGATCGAATCCTTTCCGACGTTCAATTACGCGGCGGTGAAGTCGTTGAAGATCGGGAAAGGGGCGTTGGAGTGTGCGGTGTGTTTGACGGAGTTCGAAGACGACGATACGCTGCGTTTAATCCCGAAATGTGACCACGTGTTCCATCCTGATTGCATTGACGCCTGGCTTGTGGGCCATACCACGTGCCCCGTTTGTAGGTCCAACCTCGTCCCCGACGCGCCCCACAGCGAGGCCCCCTACGCGCCTGACGTGGCGGTGGAGGTTCACGAGGAGCGAGAAGGTCATCATGATGATGACGGTGCTCATGAGGATGAGGAGCAGGAGAGAGAGTCAATGGAACAGCCCTTGCACGGGAGTGTGAGGGGAGGGGGGATGATGAGTAGGAACCGTACGATGAGGAGGAACTTGTCGATCGGACGGCCAAGATGGCTTCTTGGAAGAGTGAGGTTCACGAGATCGTTTTCGACTGGACACGTGGCGGTCAAGCAGTGGGAGAACATGGAGAGGTTCACTTTGAGGTTGCCGGATGATGTACGTAAGCAGGTTATGAGTGGCAAGCTAGAGAGGACTACTAGCTTGGTGGTTTTGCCTAGGGAGAATAGCTCTAGGAGAGGCTATCGAACCGGAACCGGAACCGGAACCGCAGCCGGGTTCGGTGAGGGTAGTAGTAGAGGTGGGGCCCGGGTGGACCGAGGCCAAAGTGTTCGGTCCGACCAGTGGGTTTTCACACTGGCTCCACCTTTCTTCTCTCGCCAACCATCCGCTAAGGTTTTGGGATCCAGCCGAGATGGGTCTTTGCGTGGTTCTGTTAGGGAGGGATCTTTGCGTGGTTCAATTAGGACCGACTCAGCTCGATTACCCGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_328999.p1 GENE.S_Transcript_328999~~S_Transcript_328999.p1 ORF type:5prime_partial len:491 (+),score=9.61,zf-RING_2|PF13639.2|4.7e-14,zf-RING_11|PF17123.1|1.1e-10,zf-RING_11|PF17123.1|8.1e+03,zf-rbx1|PF12678.3|2.5e-08,zf-C3HC4|PF00097.21|1.9e-06,zf-C3HC4_2|PF13923.2|1.2e-05 S_Transcript_328999:1-1473(+)
ILNQSYDYNCSPSPIEESHGWTPLLHLSPEVRILDFFFLPPSSLKFSLFYHLLLFTHFLSFICPFYSSLLHSLRCLFRRHSLPFSKTHKTPKHKKKQLKVSTMIRHVIILILLVHQTRPASASDPPGPPSGPDNNLGNQNFNPSMGVVIIVLIAALFFMGFFSIYIRHCSDGPASGWSGSFRARVGSVGRSRRAPRGLDPGVIESFPTFNYAAVKSLKIGKGALECAVCLTEFEDDDTLRLIPKCDHVFHPDCIDAWLVGHTTCPVCRSNLVPDAPHSEAPYAPDVAVEVHEEREGHHDDDGAHEDEEQERESMEQPLHGSVRGGGMMSRNRTMRRNLSIGRPRWLLGRVRFTRSFSTGHVAVKQWENMERFTLRLPDDVRKQVMSGKLERTTSLVVLPRENSSRRGYRTGTGTGTAAGFGEGSSRGGARVDRGQSVRSDQWVFTLAPPFFSRQPSAKVLGSSRDGSLRGSVREGSLRGSIRTDSARLPV*

Click here to download the sequence:
Link to NCBI Protein BLAST