Transcript Information: S_Transcript_32950.p2


Annotated TAIR IDAT5G48240.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19559301-19561153 | Forward length=356
E-Value3.8E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0699000960696
Replicate 24.1674158053083
Replicate 34.713143665809
Condition 2: 8 Hour
Replicate 13.5542317195222
Replicate 23.2314892479605
Replicate 32.1315847604981
Condition 3: 24 Hour
Replicate 15.5825813364852
Replicate 22.7700214148869
Replicate 35.8851436945271


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_32950.p2 GENE.S_Transcript_32950~~S_Transcript_32950.p2 ORF type:3prime_partial len:90 (+),score=0.97 S_Transcript_32950:414-680(+)
ATGCACTTGGGCCGTTTCTGGGACGGCCCAGCCGTTTCCTCGCCGTACCACCTAGCTCCGAAACGTTTTGTTGACCGCTCAAAGACGTTTCCACGCCGTTTCTTGGCGTTTCCCGTTTCCGTACTGGTACCAGTACGAGGTACGGTGCCCCAGGGCCGTTTCCGTGCTTCAGAGCCCCAGGTCAATAAGGCTCAAAATGCGCAGAAAGGGTTGAATCCTTCAAGATTTAAAGACGCAAAAGCTTTGACAAAGCGGAGAAAAGAAGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_32950.p2 GENE.S_Transcript_32950~~S_Transcript_32950.p2 ORF type:3prime_partial len:90 (+),score=0.97 S_Transcript_32950:414-680(+)
MHLGRFWDGPAVSSPYHLAPKRFVDRSKTFPRRFLAFPVSVLVPVRGTVPQGRFRASEPQVNKAQNAQKGLNPSRFKDAKALTKRRKEA

Click here to download the sequence:
Link to NCBI Protein BLAST