Transcript Information: S_Transcript_3298.p1


Annotated TAIR IDAT5G11700.2
Annotated Gene NameBEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 8203 Blast hits to 3102 proteins in 389 species: Archae - 3; Bacteria - 5624; Metazoa - 852; Fungi - 139; Plants - 704; Viruses - 77; Other Eukaryotes - 804 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3762961-3771123 | Reverse length=1476
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.7962405177073
Replicate 210.013326739757
Replicate 39.65270889837
Condition 2: 8 Hour
Replicate 115.205461616767
Replicate 215.866759907568
Replicate 314.767489870455
Condition 3: 24 Hour
Replicate 118.97273698867
Replicate 212.463663761961
Replicate 312.81828299729


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_3298.p1 GENE.S_Transcript_3298~~S_Transcript_3298.p1 ORF type:3prime_partial len:791 (+),score=192.53 S_Transcript_3298:262-2631(+)
ATGTCCGGAGCATGGAGTGTAAATCTCTGTCAAACAGTTCTGGTGGTTATTGTTGTTTTGGTGAATTCGAATAAATTAGGGTTTGGTTTTGATGATGAGGATTATGGATTGTTCTCGATTGTTGAATTGTCGAATTCTTATCCTTTCCACGGTGACTACTCCCCTCCGGCACCTACACCGCCCTCGCTCCCGCCCTTGCCGCCATCATCCTCCTGTGAGGGTGATCTCAAGGGGTTTGGGTCGTTTGATGGTGTTTGTAAGCTCAATTCTAGTGTAGAATTAACCAATGATTTGTATATAAAAGGGAATGGTAGTTTAGAGATTGAGTCAGGTGTGATGATCAGTTGCCTTTTTGCTGGCTGCTCAATAACTGTTAATTTAAGTGGGGAGTTTCATCTGGGTAGGAATGCTTCTATTGTTGCTGGAGCTCTTTGGGTTGTGGCTAGGGATGCTACTCTACTAGAAGACTCTGTAGTTAATGTTACCGCGTTGGGAGGTTCGCCCCCAGCTCAGACTAGTGGGACTCCTGCTGGGTTTCAGGGTGCAGGCGGTGGGCATGGGGGGAGAGGTGCTAATTGTTTGATTGACAACTCGAAGCTCCCGGAGGATGTTTGGGGTGGGGATGCTTATGCTTGGTCGGAATTGGACAAGCCTTGGAGTTTTGGGAGTCGGGGTGGGACTACTAGTAGAGAGGTGGATTATGGCGGTGGAGGTGGTGGAAGGATAGTGTTTAATGTAACGGGTTCAATTGTATTGGGTGGAAGTCTTTTGGCCAATGGTGGTAATGCCGGTATCAAGGGTGGTGGAGGGTCTGGTGGCAGCGTCTTTTTAAAGGCTCAAAAGATGAATGGAAAAGGACGAGTAAGCGCATCTGGAGGTGATGGATTTGCTGGAGGTGGTGGTGGAAGAGTTTGTATCCACGTCTTTAGCAGACATGATGACCAGTACTTCCTTGTTCACGGTGGAAAGAGTTTTGGCTGCCCCAAAAACTCTGGTGCTGCTGGGACATTTTATGATGCTGTGCCTCGGAGATTGATCATCAACAACTACAATTTATCAACAGAGACTGATACACTACTTCTAGAGTTTCCTAATCAGCCCCTTTGGACAAATGTCTACATACAGAATCAAGCAAAGGCTACTGTTCCTTTGCTCTGGAGCCGTCTTCAGGTTCAGGGACAACTTAGTTTGTCATCTGGTTCAGCTTTGACTTTTGGACTGGCGCATTATGCCTCATCAGCATTTGAATTAATTGCAGAGGAGCTCTTGATGAGTGATTCGTTGATCAAGATATACGGGGCTTTGCGTATGACTGTCAAGATGCACTTAATGCTGAATTCAAAAATGATGATAGACGGTAATGGTGATACAATGGTTGCTACTTCTCTTCTTGAGGTCAGCAATCTGATGGTTCTCAAGGAATCATCTGTAATTCATTCGACTGCAAATATGGGAGTTCATGGTCAAGGATACTTGAATTTAACTGGCCCTGGAAATTTGATTGAGGCTCAACGACTGGTTCTTTCATTATTTTATAGTATCAATGTTGCACCTGAATCAGTTTTGCGAGGTCCTCTGAAAAATGCAAGCTTCCATAACAACATGACTCCACCACTCTACTGTGAACACCACCACTGCCCTGTGGAAATACTTCACCCACCTGAGGATTGTAATGTGAACTCTTCGTTGCCCTTCACTCTTCAGATATGTCGAGTTGAAGATGTAAGTGTTGAGGGTGTTGTTGAAGGATCGGTTGTCCATTTCCATTGGGTCAGATCTGTGGTTGTCCCACCTACAGGCGTTATTAGTGCATCTGGATTGGGTTGCATTGGAGGTGTTGGTCAAGGGAACCTTTCCAATAATGGCCTTGGAGGAGGTGGTGGACATGGTGGAAAAGGTGGAGATGGCTATTATGATGGCAGGTTTGCCAATGGTGGTATTATATATGGTGATGCTGATTTGCCATGTGAGCTTGGCAGTGGCAGTGGAAATGCTAGTTTGCCAGGATCAACTGCAGGAGGCGGTATTATAGTGTTGGGGTCGCTGGAGCATTCCTTGCCAAGCTTGTCTGTTGATGGTTTGATGACTGCTGACGGGCAGAGCTATGAAGATGGTCTTATTGAGCATGTCAATGCAATGTTTTCAAACATTGGTCCAAACATTGGTCCTGGTGGTGGTTCTGGTGGAACCATTCTTTTGTTTGTTCAGACATTGGCTCTCAGAAACTCTTCTCGTATTTCAGCTGTTGGAGGGAATGGTAGTCCAAATGGTGGTGGTGGTGGTGGTGGTGGAAGGATACACTTCCACTGGTCAGATATTCCTGTTGCAGATGAGTACCAGCCCATAGCTGAAGTGAAAGGGAGAATCCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_3298.p1 GENE.S_Transcript_3298~~S_Transcript_3298.p1 ORF type:3prime_partial len:791 (+),score=192.53 S_Transcript_3298:262-2631(+)
MSGAWSVNLCQTVLVVIVVLVNSNKLGFGFDDEDYGLFSIVELSNSYPFHGDYSPPAPTPPSLPPLPPSSSCEGDLKGFGSFDGVCKLNSSVELTNDLYIKGNGSLEIESGVMISCLFAGCSITVNLSGEFHLGRNASIVAGALWVVARDATLLEDSVVNVTALGGSPPAQTSGTPAGFQGAGGGHGGRGANCLIDNSKLPEDVWGGDAYAWSELDKPWSFGSRGGTTSREVDYGGGGGGRIVFNVTGSIVLGGSLLANGGNAGIKGGGGSGGSVFLKAQKMNGKGRVSASGGDGFAGGGGGRVCIHVFSRHDDQYFLVHGGKSFGCPKNSGAAGTFYDAVPRRLIINNYNLSTETDTLLLEFPNQPLWTNVYIQNQAKATVPLLWSRLQVQGQLSLSSGSALTFGLAHYASSAFELIAEELLMSDSLIKIYGALRMTVKMHLMLNSKMMIDGNGDTMVATSLLEVSNLMVLKESSVIHSTANMGVHGQGYLNLTGPGNLIEAQRLVLSLFYSINVAPESVLRGPLKNASFHNNMTPPLYCEHHHCPVEILHPPEDCNVNSSLPFTLQICRVEDVSVEGVVEGSVVHFHWVRSVVVPPTGVISASGLGCIGGVGQGNLSNNGLGGGGGHGGKGGDGYYDGRFANGGIIYGDADLPCELGSGSGNASLPGSTAGGGIIVLGSLEHSLPSLSVDGLMTADGQSYEDGLIEHVNAMFSNIGPNIGPGGGSGGTILLFVQTLALRNSSRISAVGGNGSPNGGGGGGGGRIHFHWSDIPVADEYQPIAEVKGRIL

Click here to download the sequence:
Link to NCBI Protein BLAST