Transcript Information: S_Transcript_330783.p1


Annotated TAIR IDAT2G16880.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:7312262-7314493 | Reverse length=743
E-Value1E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.91768969776484
Replicate 20.19019646170271
Replicate 30.15898910416897
Condition 2: 8 Hour
Replicate 10
Replicate 20.19286076413557
Replicate 30.18375730693949
Condition 3: 24 Hour
Replicate 10
Replicate 20.39075537200599
Replicate 30.65229425185645


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_330783.p1 GENE.S_Transcript_330783~~S_Transcript_330783.p1 ORF type:internal len:116 (+),score=9.85,PPR_2|PF13041.2|0.0091,PPR_2|PF13041.2|6.3e-07,PPR_2|PF13041.2|4.7e-14,PPR_2|PF13041.2|1.5e-05,PPR_1|PF12854.3|4.7e+03,PPR_1|PF12854.3|2.3e+02,PPR_1|PF12854.3|4.8e+02,PPR_1|PF12854.3|1.4e-07,PPR_1|PF12854.3|4.3e-10,PPR|PF01535.16|4.4e+02,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|2.4e+02,PPR|PF01535.16|0.00013,PPR|PF01535.16|0.0001,PPR_3|PF13812.2|5.1e+02,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|9.7e+02,PPR_3|PF13812.2|0.014 S_Transcript_330783:3-347(+)
CATTTTGCCATCCCCATCTTCAAAAAGATGAAGCGCTTAAGGCTCAAACCAAAGCTCCTAACTTGCAACACTTTGTTTAATTCCCTGGTAAAAAACCCATCATCTCATTCTCTCTATTTTTGTAGGGAATTATTTGATGACATGACTAAAAACCTTGGGATTTCCCCAAATGTTAATACTTTCAATATTTTGATTATTGGGTATTGCTTAGAATTTAGATTTAGGGAGGCTTTGGATATGCTTAGTTTAATGGGGGGTTTTAATTGTTCCCCTGATAATGTCACTTATAATACTGTATTGAATGCTTTGTGTAGAAAAGGTAGGTTGAATGAGGTTAGAGATTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_330783.p1 GENE.S_Transcript_330783~~S_Transcript_330783.p1 ORF type:internal len:116 (+),score=9.85,PPR_2|PF13041.2|0.0091,PPR_2|PF13041.2|6.3e-07,PPR_2|PF13041.2|4.7e-14,PPR_2|PF13041.2|1.5e-05,PPR_1|PF12854.3|4.7e+03,PPR_1|PF12854.3|2.3e+02,PPR_1|PF12854.3|4.8e+02,PPR_1|PF12854.3|1.4e-07,PPR_1|PF12854.3|4.3e-10,PPR|PF01535.16|4.4e+02,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|2.4e+02,PPR|PF01535.16|0.00013,PPR|PF01535.16|0.0001,PPR_3|PF13812.2|5.1e+02,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|9.7e+02,PPR_3|PF13812.2|0.014 S_Transcript_330783:3-347(+)
HFAIPIFKKMKRLRLKPKLLTCNTLFNSLVKNPSSHSLYFCRELFDDMTKNLGISPNVNTFNILIIGYCLEFRFREALDMLSLMGGFNCSPDNVTYNTVLNALCRKGRLNEVRDL

Click here to download the sequence:
Link to NCBI Protein BLAST