Transcript Information: S_Transcript_33082.p1


Annotated TAIR IDAT3G20430.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA export protein, RNA-binding domain (InterPro:IPR019385); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7121480-7123074 | Forward length=265
E-Value1E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7321332066535
Replicate 21.0066672041452
Replicate 31.8933607386206
Condition 2: 8 Hour
Replicate 11.4595324171422
Replicate 21.5311531388406
Replicate 31.8641235548082
Condition 3: 24 Hour
Replicate 11.162845509005
Replicate 21.0340902620387
Replicate 31.1508157143019


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_33082.p1 GENE.S_Transcript_33082~~S_Transcript_33082.p1 ORF type:internal len:263 (+),score=69.05,RNA_GG_bind|PF10258.5|4.6e-20 S_Transcript_33082:3-788(+)
GGGGGACTGAATTCACGAAACGCTATTTGCTTGTCAGGCTCTCAGCCTTCTCCTCCGTCAGTATATACTACAAGTCTCTCAGTTGAACACCCAAATCTCTCCTTTGATTTCCATAATAACTTCGTTTTTGAGGTTCAATCGAAGGGTTTAATCATGGAGGGTGCTGATAGCATATTAGATGCTATACATGAAGAGGTGAGCTTGGAAGATGGGGAAGATGTGGAGATGATGGATGTAGAAGAAGGAGAGGTTGTTAATGGGCAGAAGTCATGGCAAATTGGTGAAGGAGATGAAAATGAAGCAAAGGGTGGAGAACCTCATTCAATAAATTCGGAGCGTGCTAAAAACATGAAGAAGAAGAGGAAGAAGAAGCTGAAAAAGAATAAGAGAAAAGCAGGCGCTCCTGGATCAAATGGGTTAGACATTGACAGGTTTGTCCTGGATGTCTGTAAGCGGTTAAGGGAAAGAAAGTCATACCTTGTATATACTGCTGTTGGTGTTCTTGGAGTATCTGCCTTAAGTGATCTTGTGAAGGAGGTAGATGCTGTGCAGGCTTGTGGAGGACAGAAGACTGCTGATGGGTATTGCTTTAGGACTGGTGGGGGCATATTATGGAATATACTTAAAGCACGGGACCCGAATGCCTATAAGGAGATAATGAAGAAAGGAAAAGACTTTGAGAAACAATTTAGAAAACCAATGGGTGCACAAACATCGACAAGGAGTTACAATGCACCGCAAAGTGCAGAGGCAATCACCAGTAAGACTTCAGCCAGTGATGCAGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_33082.p1 GENE.S_Transcript_33082~~S_Transcript_33082.p1 ORF type:internal len:263 (+),score=69.05,RNA_GG_bind|PF10258.5|4.6e-20 S_Transcript_33082:3-788(+)
GGLNSRNAICLSGSQPSPPSVYTTSLSVEHPNLSFDFHNNFVFEVQSKGLIMEGADSILDAIHEEVSLEDGEDVEMMDVEEGEVVNGQKSWQIGEGDENEAKGGEPHSINSERAKNMKKKRKKKLKKNKRKAGAPGSNGLDIDRFVLDVCKRLRERKSYLVYTAVGVLGVSALSDLVKEVDAVQACGGQKTADGYCFRTGGGILWNILKARDPNAYKEIMKKGKDFEKQFRKPMGAQTSTRSYNAPQSAEAITSKTSASDAD

Click here to download the sequence:
Link to NCBI Protein BLAST