Transcript Information: S_Transcript_330992.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value8E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.08342633616044
Replicate 20.13832469942016
Replicate 30.17344265909342
Condition 2: 8 Hour
Replicate 10.26740301338098
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_330992.p1 GENE.S_Transcript_330992~~S_Transcript_330992.p1 ORF type:3prime_partial len:319 (+),score=25.22,RVT_1|PF00078.23|1.2e-37 S_Transcript_330992:61-954(+)
ATGACAGATTTTAGACCCATTAGCCTCTGTAACGTCATTTTCAAATTGATTACCAAAGTTCTAGCCAATAGACTGAAAGTCATCCTTCTTGACATTATCTCCCCTAGTCAAAGTGCTTTCACCCCGGGACGGCTGATAACGGATAATATCCTGGTGGCGTTCGAGACTTGTCACTTCATGAAAAATCTTGATTTCAGGGATGGTTTTGGGGCGTTGAAGTTAGACATGGCCAAGGCATACGATAGGGTGGAGTGGTCCTTCTTGGAGAGGGTATTGTGTAAGATGGGTTTTGCTTATACTTGGGTAGATCGAGTCATGATGTGTATCAAGTCGGTTTCTTTTAATGTCCTTATTAATGGGAACCCTACCGCAGAAATACTTCCTTCACGGGGTTTGCGGCAGGGGGACCCAATTTCACCCTATTTATTTTTATGTGTCACAGAAGCACTTTCGGGACTGATCAGAGGTGAGGAGATGAATGGGGCCTTGCAGGGGATAAGAGTGTGTGGAGGTGCACCCTCAATCACCCATTTATTCTTCGCCGATGATAGTCTAGTATTCTTCAAGGCTAACCGGTCACAAGCTGAAAAGATGCGTGACATACTGAGCATTTATGAGAGGGCCTCGGGTCAAAAAGTGAGCTTGGAAAAGTCGAAAATCTGGTTCAGCAAAGGTGTGCGACATGTTAATAGAGGAGAGGTGTGTATTGCCCTGGCTGTGGAGGAAGTTCCTCAACATGATCGATATTTAGGGTTGCCCATGATAGTTGGGAAGTCGAAGAAAGTCCTGTATGGCTCGCTAAAGGAGCGATTGTGGAAGAAGCTTCAAGGCTGGAAAGGTATGTTGTTGTCCAAAGCGGGTAGAGAAGTAATGATAAAGGCAGTGGCCCAATCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_330992.p1 GENE.S_Transcript_330992~~S_Transcript_330992.p1 ORF type:3prime_partial len:319 (+),score=25.22,RVT_1|PF00078.23|1.2e-37 S_Transcript_330992:61-954(+)
MTDFRPISLCNVIFKLITKVLANRLKVILLDIISPSQSAFTPGRLITDNILVAFETCHFMKNLDFRDGFGALKLDMAKAYDRVEWSFLERVLCKMGFAYTWVDRVMMCIKSVSFNVLINGNPTAEILPSRGLRQGDPISPYLFLCVTEALSGLIRGEEMNGALQGIRVCGGAPSITHLFFADDSLVFFKANRSQAEKMRDILSIYERASGQKVSLEKSKIWFSKGVRHVNRGEVCIALAVEEVPQHDRYLGLPMIVGKSKKVLYGSLKERLWKKLQGWKGMLLSKAGREVMIKAVAQS

Click here to download the sequence:
Link to NCBI Protein BLAST