Transcript Information: S_Transcript_331275.p1


Annotated TAIR IDAT1G79700.2
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29990440-29993658 | Reverse length=313
E-Value4.8E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2306590166557
Replicate 20.51012230190786
Replicate 31.3858703415422
Condition 2: 8 Hour
Replicate 11.9722904339545
Replicate 23.6208772364875
Replicate 33.3267507822803
Condition 3: 24 Hour
Replicate 11.5152520340297
Replicate 21.1790422207348
Replicate 30.58316865676569


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_331275.p1 GENE.S_Transcript_331275~~S_Transcript_331275.p1 ORF type:internal len:173 (+),score=35.04,AP2|PF00847.16|5.1e-12 S_Transcript_331275:1-516(+)
CTTTCCATCTTCTTCACTTCCTATTTTGGTCTAATTGATGATTACATACACAAAATCCCTTTTGGTCTCAATATTGTAGTAAAACTTCACAATATGGCGAAGACATCAACTAAGAAGCAGAAGATCAAGAGTTCTGATCATAACAAGAGTATTAGTAGTAATCAAGTTGAGAAAACTTCTGTTACCAAAGTAAAAGGAAAGAGGAAAAGTGTTCCAAGAGAATCCCCTTCTCAACGGAGCTCTATTTACCGAGGTGTTACAAGGCATAGGTGGACCGGCAGATATGAAGCACATTTGTGGGACAAGGACTGCTGGAATAATTCCCAGAAGAAAAAAGGGAGACAAGTGTATCTTGGTGCTTATGATGATGAAGCAGCAGCAGCGCATGCTTATGATTTGGCAGCATTGAAATACTGGGGCAAGGAAACTACACTTAATTTTCCCTTGTCAACTTACGAGAATGAAATGAAAGAGATGGAGGGATTTTCTAAGGAAGAGTATGTAGGATCACTAAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_331275.p1 GENE.S_Transcript_331275~~S_Transcript_331275.p1 ORF type:internal len:173 (+),score=35.04,AP2|PF00847.16|5.1e-12 S_Transcript_331275:1-516(+)
LSIFFTSYFGLIDDYIHKIPFGLNIVVKLHNMAKTSTKKQKIKSSDHNKSISSNQVEKTSVTKVKGKRKSVPRESPSQRSSIYRGVTRHRWTGRYEAHLWDKDCWNNSQKKKGRQVYLGAYDDEAAAAHAYDLAALKYWGKETTLNFPLSTYENEMKEMEGFSKEEYVGSLR

Click here to download the sequence:
Link to NCBI Protein BLAST