Transcript Information: S_Transcript_33135.p1


Annotated TAIR IDAT2G22600.1
Annotated Gene NameRNA-binding KH domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:9596617-9599050 | Forward length=632
E-Value1.9E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9200688852151
Replicate 24.9662682833216
Replicate 35.0818923490387
Condition 2: 8 Hour
Replicate 16.3452002237265
Replicate 26.6565655719756
Replicate 36.3699363476723
Condition 3: 24 Hour
Replicate 14.6911392748236
Replicate 24.8963215177879
Replicate 34.9922028382701


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_33135.p1 GENE.S_Transcript_33135~~S_Transcript_33135.p1 ORF type:complete len:773 (+),score=126.56,KH_1|PF00013.25|7.9e-09,KH_1|PF00013.25|9.9e-14,KH_1|PF00013.25|6.2e-10,KH_1|PF00013.25|3.3e-13,KH_1|PF00013.25|8.2e-13,KH_3|PF13014.2|1.1e-06,KH_3|PF13014.2|1.4e-07,KH_3|PF13014.2|3.5e-09,KH_3|PF13014.2|1e-08,KH_3|PF13014.2|4.3e-06,KH_2|PF07650.13|0.35,KH_2|PF07650.13|8.2e-06,KH_2|PF07650.13|2.1,KH_2|PF07650.13|7.5,KH_2|PF07650.13|70,KH_4|PF13083.2|1.3e+02,KH_4|PF13083.2|0.028,KH_4|PF13083.2|0.01,KH_4|PF13083.2|2.1e+02,KH_4|PF13083.2|66 S_Transcript_33135:543-2861(+)
ATGCTGATATTTGGGTGGCCCAATAAGGCTCTAAGCCACTGTAGAGCCCTTTCCTTTCCTTTTTTCTCCCCCCCAAAAAAAGCCTTCATATGCTCAGTGCTCGCTCGTGCTCATTGCTCCCTCTCCAAACTCTCAGTTTTCTTCATCCTCAACTCACCAAGATCTCACTTTCAATGTTCATCCAAGTTCGTTTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGATTCGCGTCGGCCAGCCAGTGAATCAGCCCAAAAACAATCCTTCCAAATCCAAACCCCCCAAACACGCCAAACCCCACAATTCACTCTTTCATAATCATTCATTGAGAGCCAATTCATTTCTCTTTCCTCCATCCAAACGCCCGATGTCAGACCCACTCACTCCTCTCCCCTCTCTCTCCAACGGCACTTCCACCACTGCCAAACGCCTCAAACAGCCCCCACCCCCACTTCAAGTCCCCGCCGGCCACGTGTCCCTCCGCATGTTCTGCCACGCGTCCCTCATTGGTGCCTTCATCGGAAAATCCGGTTCCTCAATCAAACAACTTCAACTCGATACCGGGTCCAAGATCCGGGTCGAGGACTCCCTCCAACCCGGCTCCGACCACCGCGTCATCCTCATTGTTGCCCCTTCTACTCCTTTCAAGAAGCTTCTATTTGGTGACGTCGAGTATGACGTCAGTGCCGCCCAGGATGCTGCTGTTAGGGTTTTCGATAAGGTTCTGGAAGTTTCCGCCGAAATTAACGGCACGGTGTCGTTTAGGTTTTTGATTGATGAAACTCAGGCTGGGTCGGTGATAGGAAAGGGTGGGAAAGTTATCGAGAAGATGAGGAAAGAGAGTGGGGCTAAAATTAGGGTTTTGTTAGGTGATCACTTGCCCCCTGGTGTTTCTTCCCCTGATGAAGTTGTTGAGATTGAGGGGGATGCATTGGCGGTTAAGAAAGCACTCATTGGTGTGTCTGGTCGCTTGCAAGAATGTCCACAAGGAGAAAAACCAAGTATTAAAGAGAGTAGACCTTTGCAGTCAACTTCGCAGCCAACTGTACCTCTGTCTGATTTTCGTGTTGACCCTCCTCTGCAGCGGATGAGCAGACCTTTTCAGTCAACTTCACAGCCACCTGTACCTGTAACTGAGTTTGACCCTCCTCCGCAGCGGATGCCAATATCTACGGCAACTACTTCATCTAGTCCTACTTTGTCAGGGAGGCCTCTGTTGTTTGAGAATGATAGGTTCACAGCATCAGATACAAAATTGCAAAACCAAGAAGTAGTTTTCAAAATTCTTTGTTTGAATGATAGAGTAGGTGGCGTCATTGGAAGAGGAGGGTCCATCGTAAGAGCACTTCAGGACGAGACGGGGGCTAACATAAGTATTGGGGCTGCTTTGTCCAATTGTGATGAACGACTAATCACTATTACTTCAAAGGAGGATGTGGAGTCAAGGTATTCTCCTGCGCAACGAGCAGCAGTCCTGGTTTTTTCTAGGTCTGTTGAGGCTGGTGTTGAGAAGGGACTGGAAACTAGCATGAGCAAAGGTTCCTCTGTCTCTGCACGGCTTTTGGTACCGGCCAACCAAGTTGGTTGTTTGCTTGGTAAAGGAGGGGTTATAGTTTCTCAGATGAGAAAGGCAACTGGCGCCAGCATAAGCATTATACGAGACCAGGTGCCCAAGTGTGCTTCAGAGGATGATGAAGTGGTTGAGATATCAGGCCAGTTTGTAAATGTACAAGATGCTTTATATCAGGTCACCAACAGACTTCGGAATAATCTTCTCCCCAGTAAACTGATGAATGATACTGGAAGTTGGACTAACAACTCACTAAGATTGGATGGAAGAGTTGGAGATACCACATTTGTTGGTTCGCACCAATCATCGGGTCCATCTCAGTCCATTGATCGACAAGCTACTATAAGGCAGGGTTTGGACCCTCTATTGCGTCCTCATAGATTGGACAGTTCTCCTTTGGGGATCCGGACTTCAGAGGTAGCGGCTGGAGTAAATTCAAAGACTTCTGTGAATCTTGGCGGAGGTTTCTCCACCAATGGTGCAGTAGAGCTTGTCAGCTCTAAAAGACCGGCTATTGTGACAAATACAACAGTAGAGATTTTAGTCCCTGAAGATGCTGTTAGCTCTGTTTACGGCGAGAATGGGAGCAATCTAGCCCGTATAAGACAGATATCTGGTGCAAAGGTGGCTGTCCATGAGGCTCGTCCAGGAACAAGGGATAGGACTGTCATAATATCTGGTTCGCCTGATGAGACGCAGGCAGCACAGAGCCTTCTTCATGCATTCATCCTAACCGGACCATCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_33135.p1 GENE.S_Transcript_33135~~S_Transcript_33135.p1 ORF type:complete len:773 (+),score=126.56,KH_1|PF00013.25|7.9e-09,KH_1|PF00013.25|9.9e-14,KH_1|PF00013.25|6.2e-10,KH_1|PF00013.25|3.3e-13,KH_1|PF00013.25|8.2e-13,KH_3|PF13014.2|1.1e-06,KH_3|PF13014.2|1.4e-07,KH_3|PF13014.2|3.5e-09,KH_3|PF13014.2|1e-08,KH_3|PF13014.2|4.3e-06,KH_2|PF07650.13|0.35,KH_2|PF07650.13|8.2e-06,KH_2|PF07650.13|2.1,KH_2|PF07650.13|7.5,KH_2|PF07650.13|70,KH_4|PF13083.2|1.3e+02,KH_4|PF13083.2|0.028,KH_4|PF13083.2|0.01,KH_4|PF13083.2|2.1e+02,KH_4|PF13083.2|66 S_Transcript_33135:543-2861(+)
MLIFGWPNKALSHCRALSFPFFSPPKKAFICSVLARAHCSLSKLSVFFILNSPRSHFQCSSKFVFLSLSLSLSLLIRVGQPVNQPKNNPSKSKPPKHAKPHNSLFHNHSLRANSFLFPPSKRPMSDPLTPLPSLSNGTSTTAKRLKQPPPPLQVPAGHVSLRMFCHASLIGAFIGKSGSSIKQLQLDTGSKIRVEDSLQPGSDHRVILIVAPSTPFKKLLFGDVEYDVSAAQDAAVRVFDKVLEVSAEINGTVSFRFLIDETQAGSVIGKGGKVIEKMRKESGAKIRVLLGDHLPPGVSSPDEVVEIEGDALAVKKALIGVSGRLQECPQGEKPSIKESRPLQSTSQPTVPLSDFRVDPPLQRMSRPFQSTSQPPVPVTEFDPPPQRMPISTATTSSSPTLSGRPLLFENDRFTASDTKLQNQEVVFKILCLNDRVGGVIGRGGSIVRALQDETGANISIGAALSNCDERLITITSKEDVESRYSPAQRAAVLVFSRSVEAGVEKGLETSMSKGSSVSARLLVPANQVGCLLGKGGVIVSQMRKATGASISIIRDQVPKCASEDDEVVEISGQFVNVQDALYQVTNRLRNNLLPSKLMNDTGSWTNNSLRLDGRVGDTTFVGSHQSSGPSQSIDRQATIRQGLDPLLRPHRLDSSPLGIRTSEVAAGVNSKTSVNLGGGFSTNGAVELVSSKRPAIVTNTTVEILVPEDAVSSVYGENGSNLARIRQISGAKVAVHEARPGTRDRTVIISGSPDETQAAQSLLHAFILTGPS*

Click here to download the sequence:
Link to NCBI Protein BLAST