Transcript Information: S_Transcript_33159.p1


Annotated TAIR IDAT1G23820.1
Annotated Gene Namespermidine synthase 1
Annotated Gene Symbol(s)SPDS1
Annotation TypeOrtholog
Chromosome Positionchr1:8420278-8422724 | Forward length=378
E-Value9.9E-202
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 176.966009254016
Replicate 274.399236377188
Replicate 365.021123522012
Condition 2: 8 Hour
Replicate 1259.47911002352
Replicate 2241.7049442525
Replicate 3228.41868513065
Condition 3: 24 Hour
Replicate 160.073429599134
Replicate 269.021607982513
Replicate 369.718889790278


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_33159.p1 GENE.S_Transcript_33159~~S_Transcript_33159.p1 ORF type:complete len:352 (+),score=88.21,Spermine_synth|PF01564.13|7e-98,Spermine_synth|PF01564.13|4.3e+03 S_Transcript_33159:248-1303(+)
ATGGCTGAAGAAAGTGCTGTCATCTCTGGAACTGATTTGCCTGTCAAGAGGCCTAGAGAAGAAGAACAACAAGAAAATACTATGAGTGAAAACAACAACAATGTAAATGGGGCCTCAAAAATGGAGACTGATAACAATACCCCAAAAGAAAACCCTGATTCCCTTTCTTCTATCATTCCTGGATGGTTCTCTGAGATTAGCCCTATGTGGCCTGGCGAGGCACATTCACTGAAAGTGGAGAAGATTCTGTTCCAAGGGAAGTCAAAGTACCAGAATGTTATGGTCTTTCAGTCCGCGACATATGGGAAAGTTCTTGTTTTAGATGGGGTGATTCAGCTGACTGAGAGGGATGAGTGTGCATACCAAGAGATGATCACTCACCTCCCACTTTGCTCTATTCCAAACCCAAAAAAGGTTCTGGTTATTGGAGGAGGAGATGGAGGAGTCCTCCGTGAAGTGGCTCGTCATTCATCAGTGGAGCACATAGATATCTGTGAAATTGATGAGATGGTAGTAACGGTTTCTAAGGAATTTTTCCCTGACGTGGCTGTTGGATATGATGATCCTCGAGTAAATTTGCATATTGGTGATGGAGTTGCATTTTTGAAGGCAGCTCCAGAGGGAAGTTATGACGCAGTCATCGTTGATTCATCTGATCCCATAGGCCCAGCACAAGAACTTTTCGAGAAGCCCTTCTTCGAGTCAGTCGCAAAGGCTCTTCGACCTGGAGGAGTTGTGTGCACTCAGGCTGAAAGTATATGGCTTCACATGCATATTATTGAAGATATTGTTGCAAACTGCCGTCAAATTTTCAAGGGTTCTGTCAACTATGCATGGACAACCGTTCCCACATATCCAAGTGGCGTGATTGGTTTTATGCTCTGTTCTACGGAGGGGCCAGCAGTTGATTTCAAGCACCCAGTGAACCCTGTTGATAAAGTTGAGGACAGTGCAAACACAAAGCGACCTTTGAAATTTTACAACTCGGAGATCCATGCAGCAGCTTTCTGTTTGCCCTCTTTCGCCAAGAGGATCATCGAGTCAAAAGCTAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_33159.p1 GENE.S_Transcript_33159~~S_Transcript_33159.p1 ORF type:complete len:352 (+),score=88.21,Spermine_synth|PF01564.13|7e-98,Spermine_synth|PF01564.13|4.3e+03 S_Transcript_33159:248-1303(+)
MAEESAVISGTDLPVKRPREEEQQENTMSENNNNVNGASKMETDNNTPKENPDSLSSIIPGWFSEISPMWPGEAHSLKVEKILFQGKSKYQNVMVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHSSVEHIDICEIDEMVVTVSKEFFPDVAVGYDDPRVNLHIGDGVAFLKAAPEGSYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVCTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPAVDFKHPVNPVDKVEDSANTKRPLKFYNSEIHAAAFCLPSFAKRIIESKAN*

Click here to download the sequence:
Link to NCBI Protein BLAST