Transcript Information: S_Transcript_332019.p1


Annotated TAIR IDAT3G07890.1
Annotated Gene NameYpt/Rab-GAP domain of gyp1p superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2516639-2518784 | Reverse length=400
E-Value5.2E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0943078823355
Replicate 21.9582357595427
Replicate 31.6369292381894
Condition 2: 8 Hour
Replicate 11.514228898258
Replicate 22.6475560520387
Replicate 31.6396805849986
Condition 3: 24 Hour
Replicate 10.90481765937372
Replicate 22.1456863030861
Replicate 33.1341001923517


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_332019.p1 GENE.S_Transcript_332019~~S_Transcript_332019.p1 ORF type:5prime_partial len:169 (-),score=28.35,RabGAP-TBC|PF00566.14|1.9e-40 S_Transcript_332019:462-968(-)
GTGGGATACTCTTTTCGAGATTCTTATGTTGGTTATTGTCAGGGTTTAAATTATGTTGCGGCATTGTTGTTACTTGTTATGAAGACAGAAGAAGATGCTTTTTGGATGCTGGCTGTTCTTCTGGAAGACGTGTTAGTTAATGATTGTTACGCAAATAACTTGTCTGGCTGCCATGTTGAGCAGAGGGTGTTCAAAGATTTGCTCTCTAAAAAGTGTCCTAGCATAGCAGCTCATTTGGAAGCGTTGGAGTTCGATGTCTCCCTGGTGGCCACTGAATGGTTCTTGTGCCTCTTCTCAAAAAGCTTGCCTTCAGAGACAACTTTACGAGTGTGGGATGTCCTTTTCTATGAGGGAGCTAAAGTTTTGTTTCATGTAGCATTGGCCATATTTAAGGTGATGATATTTTCCCATTCTATTTCTGCTCTCACCATCTCTGTTGAAGATCAACATATTCTAGACTGGTTCTTTCTAATGAACCGTCTTGTATTCATTGACTTGAACACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_332019.p1 GENE.S_Transcript_332019~~S_Transcript_332019.p1 ORF type:5prime_partial len:169 (-),score=28.35,RabGAP-TBC|PF00566.14|1.9e-40 S_Transcript_332019:462-968(-)
VGYSFRDSYVGYCQGLNYVAALLLLVMKTEEDAFWMLAVLLEDVLVNDCYANNLSGCHVEQRVFKDLLSKKCPSIAAHLEALEFDVSLVATEWFLCLFSKSLPSETTLRVWDVLFYEGAKVLFHVALAIFKVMIFSHSISALTISVEDQHILDWFFLMNRLVFIDLNT*

Click here to download the sequence:
Link to NCBI Protein BLAST