Transcript Information: S_Transcript_332207.p1


Annotated TAIR IDAT2G21090.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:9045695-9047488 | Reverse length=597
E-Value7E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25201705715133
Replicate 20.20892793141586
Replicate 30.10478827320228
Condition 2: 8 Hour
Replicate 10.64622394900403
Replicate 20.42370925454028
Replicate 30.92853124036851
Condition 3: 24 Hour
Replicate 10.082745770797705
Replicate 20.12877165668379
Replicate 30.23884511747269


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_332207.p1 GENE.S_Transcript_332207~~S_Transcript_332207.p1 ORF type:complete len:528 (+),score=70.64,PPR_2|PF13041.2|12,PPR_2|PF13041.2|2.5e-05,PPR_2|PF13041.2|0.00045,PPR_2|PF13041.2|0.001,PPR_2|PF13041.2|4.1e-07,PPR_2|PF13041.2|3.1e-11,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|5.6e-07,PPR_2|PF13041.2|8.1,PPR_2|PF13041.2|3.4,PPR|PF01535.16|16,PPR|PF01535.16|0.0006,PPR|PF01535.16|7.5e+02,PPR|PF01535.16|7.2e+02,PPR|PF01535.16|0.00051,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|6.5e-06,PPR|PF01535.16|0.099,PPR|PF01535.16|0.0017,PPR|PF01535.16|0.023,PPR|PF01535.16|0.063,PPR|PF01535.16|5.4e+03,PPR_1|PF12854.3|22,PPR_1|PF12854.3|0.55,PPR_1|PF12854.3|9.3e+02,PPR_1|PF12854.3|46,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|6.6e-05,PPR_1|PF12854.3|0.68,PPR_1|PF12854.3|0.46,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|0.047,PPR_1|PF12854.3|0.065,PPR_1|PF12854.3|6.4e+02,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.27,PPR_3|PF13812.2|3.4e+03,PPR_3|PF13812.2|0.31,PPR_3|PF13812.2|0.00075,PPR_3|PF13812.2|4.1,PPR_3|PF13812.2|2.2e+03,PPR_3|PF13812.2|2,PPR_3|PF13812.2|8.9,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|0.4 S_Transcript_332207:82-1665(+)
ATGTCCAACATTTTACCTAGCGTATATGACCTGATAATTTGCCGCCAATTCTGTACACTTCAAACTGCTACTTTGAACCAGATGATGAAAATTTCCCTTCAGAAGGGCAAACTTGATGATGCTGTCAACTTACTTCAGCGAAATCCCATGTCTAGAAACGTTGTATCGTGGAATATAGCGCTATCTGGGTGTATTAAAGACAGCGAAATGAAGCTTGCACACCACTTGTTCGATGAAATGCCTGAAAGAGACATTGTCTCTTGGAATACTTGGCTGTCTCTTTTGCACAAGATTAAAGATCCACAAGGAACTTGCGAGTCTTATCTCCAGCTACAAATATCTGGTCCACGACCCAATAATTACACATTTTCGATCGTTGTCACCTCTATTTTGGGTAGTATTTTCAATGTGCTAATCCCTCAGCTACATGCTCAAGTTGTTACTTTGGGTTATAATTCCAGTGAGTTTGTTGGCACAGCACTAATGAGAGGGTATACCAATTTGGGGGACCATGCTGCTTTAGGGTGTGTATTTGAGGATGTATTAGAGAAGTGTGTCAGTTTGTGGAACGCGTTAATTTTGGGTTATATGGATTTGGGTTTAGCCCAAGAGGCTCAGAGAACATTCAACAAGATGCCCGAGAAGAATGTGGTTTCTTGGACTACCATGGTTGATGGGTATTTGAAGAACAAACAAGTTAACAAGGCTCGATATGTGTTTGACAAGATGGATCAGAAGAATGTCGTGTCTTGGACTGTAATGATTTCTGGATATGTAAGAGTAGAAAACTACTCGGATGCCTTGCGTTTATATCTTTTGATGGCAAGATCAGGGATACAAGCTAATCAGCATACATTTGCAAGCATATTGGCTGCTTGTGCAGGGCAATCTGAACTTCTAACAGGAAAACAAGTTCATGCTAGTATAATAAACCTAGGTATACCTATGGATGTCGTATTGTCGACAGCCCTCATTGATATGTATGCCAAATGTGGAGACATTGAAGCAGCATGCTGTATCTTTGAGATGACGCCTAACAAAACTCTGGCCTCTTGGAATTCGATAATAGGCGGGTGTGCAAGACACGGGCTTGCCAGAAGGGCTTTAGATGAGTTTGAGAAAATGAATAGCAGCGATCTAAGGCCTGATCACGTAACCTTTGTCAATATCTTATCAGCATGTGCTCATCGAGGTCTGATTGACGAAGGTGAAAGGCTCTTCGGCTGCATGGAAACAGTTTACGAAATATCACCAGAAAAGGAGCACTATGCTTGCATGGTAGATCTATATGGGAGAGCAGGTCACATAGACAAGGCAGCACGCCTGATTGAATGTATGCCCTTTGAGCCAGACGTAGTTGTATGGGATGCATTGCTTGGGGCTTGTGGCCTGCATTTAGATCCTGAATTCAGCAATGATGCCGCAGATGCAATTCTGAACTTGGAAAAGGATCACCCTGCTGCATATTCGATGCTGTCAAAAATCCTTGGTGAAAAAGGTGTGTGGAGCTCTCTGGCTGAGTTGAAAGTTGTGATGAAAGATAAACACATTACAAAGCAGAAAGCTGGTAGTTGGATCAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_332207.p1 GENE.S_Transcript_332207~~S_Transcript_332207.p1 ORF type:complete len:528 (+),score=70.64,PPR_2|PF13041.2|12,PPR_2|PF13041.2|2.5e-05,PPR_2|PF13041.2|0.00045,PPR_2|PF13041.2|0.001,PPR_2|PF13041.2|4.1e-07,PPR_2|PF13041.2|3.1e-11,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|5.6e-07,PPR_2|PF13041.2|8.1,PPR_2|PF13041.2|3.4,PPR|PF01535.16|16,PPR|PF01535.16|0.0006,PPR|PF01535.16|7.5e+02,PPR|PF01535.16|7.2e+02,PPR|PF01535.16|0.00051,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|6.5e-06,PPR|PF01535.16|0.099,PPR|PF01535.16|0.0017,PPR|PF01535.16|0.023,PPR|PF01535.16|0.063,PPR|PF01535.16|5.4e+03,PPR_1|PF12854.3|22,PPR_1|PF12854.3|0.55,PPR_1|PF12854.3|9.3e+02,PPR_1|PF12854.3|46,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|6.6e-05,PPR_1|PF12854.3|0.68,PPR_1|PF12854.3|0.46,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|0.047,PPR_1|PF12854.3|0.065,PPR_1|PF12854.3|6.4e+02,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.27,PPR_3|PF13812.2|3.4e+03,PPR_3|PF13812.2|0.31,PPR_3|PF13812.2|0.00075,PPR_3|PF13812.2|4.1,PPR_3|PF13812.2|2.2e+03,PPR_3|PF13812.2|2,PPR_3|PF13812.2|8.9,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|0.4 S_Transcript_332207:82-1665(+)
MSNILPSVYDLIICRQFCTLQTATLNQMMKISLQKGKLDDAVNLLQRNPMSRNVVSWNIALSGCIKDSEMKLAHHLFDEMPERDIVSWNTWLSLLHKIKDPQGTCESYLQLQISGPRPNNYTFSIVVTSILGSIFNVLIPQLHAQVVTLGYNSSEFVGTALMRGYTNLGDHAALGCVFEDVLEKCVSLWNALILGYMDLGLAQEAQRTFNKMPEKNVVSWTTMVDGYLKNKQVNKARYVFDKMDQKNVVSWTVMISGYVRVENYSDALRLYLLMARSGIQANQHTFASILAACAGQSELLTGKQVHASIINLGIPMDVVLSTALIDMYAKCGDIEAACCIFEMTPNKTLASWNSIIGGCARHGLARRALDEFEKMNSSDLRPDHVTFVNILSACAHRGLIDEGERLFGCMETVYEISPEKEHYACMVDLYGRAGHIDKAARLIECMPFEPDVVVWDALLGACGLHLDPEFSNDAADAILNLEKDHPAAYSMLSKILGEKGVWSSLAELKVVMKDKHITKQKAGSWIS*

Click here to download the sequence:
Link to NCBI Protein BLAST