Transcript Information: S_Transcript_332499.p1


Annotated TAIR IDAT1G20230.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7009570-7011852 | Forward length=760
E-Value1E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24949688657982
Replicate 20.24131176078532
Replicate 30.23053420104501
Condition 2: 8 Hour
Replicate 10.83302305926301
Replicate 20.90885635098889
Replicate 31.4321585109597
Condition 3: 24 Hour
Replicate 10.17066315227027
Replicate 20.2478854391163
Replicate 30.31527555506395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_332499.p1 GENE.S_Transcript_332499~~S_Transcript_332499.p1 ORF type:complete len:640 (+),score=121.79,PPR|PF01535.16|9.7,PPR|PF01535.16|0.0017,PPR|PF01535.16|0.0064,PPR|PF01535.16|3.1e-07,PPR|PF01535.16|0.00075,PPR|PF01535.16|4.7e-05,PPR|PF01535.16|3,PPR|PF01535.16|0.43,PPR|PF01535.16|0.016,PPR|PF01535.16|0.00055,PPR|PF01535.16|0.0088,PPR|PF01535.16|0.079,PPR|PF01535.16|0.019,PPR_2|PF13041.2|59,PPR_2|PF13041.2|5.6e-08,PPR_2|PF13041.2|0.048,PPR_2|PF13041.2|3.2e-07,PPR_2|PF13041.2|3.1e-05,PPR_2|PF13041.2|0.0009,PPR_2|PF13041.2|3.6e+02,PPR_2|PF13041.2|1.1e-05,PPR_2|PF13041.2|0.0075,PPR_2|PF13041.2|1.4e-08,PPR_2|PF13041.2|2,PPR_2|PF13041.2|6,PPR_2|PF13041.2|0.82,PPR_1|PF12854.3|9.5,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|0.03,PPR_1|PF12854.3|3,PPR_1|PF12854.3|3e-06,PPR_1|PF12854.3|2e-05,PPR_1|PF12854.3|7.3e+03,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|0.058,PPR_1|PF12854.3|0.002,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|0.00052,PPR_1|PF12854.3|8.4,PPR_3|PF13812.2|3.1e+03,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|0.47,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|0.00064,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|0.0025,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|4,PPR_3|PF13812.2|6.8e+02,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|8.8,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|0.34,PPR_3|PF13812.2|0.0091,TPR_14|PF13428.2|3.3e+03,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|4.2e+03,TPR_14|PF13428.2|2.5e+02,TPR_14|PF13428.2|36,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|1.1e+02,TPR_14|PF13428.2|7.2e+02,TPR_14|PF13428.2|17,TPR_14|PF13428.2|6.5e+02,TPR_19|PF14559.2|1.6e+03,TPR_19|PF14559.2|1e+02,TPR_19|PF14559.2|70,TPR_19|PF14559.2|53,TPR_19|PF14559.2|1 S_Transcript_332499:132-2051(+)
ATGAGATCAAAATGGCACCTTCTAAGCCATTTCTCATCTCTTCCAATCACCGATTTCTCTTTTCTTTCCTCTTCACTACTCACCCACCTTCTCCAACTTTGCAGCAATTCAAGAGCATTGCTTCAAACCAAACAAACCCACCAGCAAATCATACAGCAAGGGTTACATAAGGACCGATTCATTATCACCAAATTAGTTCAGTCCTATGCCGAGTGTAACCATTTAGATTATGCACACAAGCTGTTCGACGAATTGTCTGAACCAAATGTTTTTGCTTGGACTACCCTCCTTGCATTTTACTCAAAGAATGGGCTTTTCAATGAATGTCTGAGGGTTTATGGTGCAATGAGATTTCAGGGTGTGCTGCCTGATCAGTATGTTTTCCCTAAGGTCTTGAGGGCATGTGCTCAATTGTCAGTGCTTGAGACTGGAACAATGGTTCATAAAGATGTAATTGTACGTGGGGTTGAGTTTAATTTGCAAGTTTGCAGTTCATTGATTGACATGTATGCAAAATGTGAGGAGATTGAGAGTGCTAGACGGGTTTTCGACAATATGATGGTAAGAGACTTGTTGTCATGGAATGCAATGATTTCTGGTTATGTGGCCAATGGGTTTCCTGAATTAGCTGCGGAGTTATTTGGGTCAATGAGGGTTGATGGCATTGAACCTGATTTAGTCACTTGTAATACCGTGATGGATGCTTATTTTCAGATGGGCAAGCGTGAGGAGGCTCTCAGAGTTTTTGAGCAGACTGTTGAGCCTAATATTATCTCTTGGACCACTCTAGTTTCTGGCTATGCGAGGAATGGGGATCATGAGGCATCTTTGAGGACTTTTAGGGATATGATGAATTATATGGTGTTTATTCCTGATCTAGACTCTCCGTCTAATGCAATGGTGTCTTGCCGCCATATGAAGGCTCTAAGAAACGGGCAAGAGATTCATGCATATGGGATGAAAACTCATTCGCATTGCTCATTTTACAAGTCAGTTGGACCTGCCTTACTGACAATGTACTCTAGGTGTGGGAGAATTCATGATATGAGGAATGTGTTTGAGTTGATGGACATATTCGATGTTGTTACTTGGAATGCCATGATTTTTGGCCTCATTGACCTAGCAATGGGACATCCAGCTCTTGAAGCATTCCGCAAGATGCAGGTTTTAAGGATCAAGACTAATCAAACCACACTGTCAACTATCTTGCCTGTTTGCAGTCTGAAGTCTGGCAAACAAATTCACGCCTACATTATAAGGAGCAACTTCTTGTCTGTAGTTCCTGTCCTGAATGCTTTGATCAGCATGCACTGTAAATGTGGATCCATCAATACTGCCAACCTTGTTTTCTCCAAGATGTCAAAAAGAGATTTAGTCTCATGGAATACTATAATTGGGGGGTTTCCAATGCACGGCAAAGGAGATAGTGCTCTTCAGCTTCTAAAGAAGATGGTAGCTTCTGGTCTTTACCCTGACTCTGTCACTTTGACATCAGCTCTTGCAGCATGCAGTCACTCAGGTCTTTTCGAAGAGGGGATTGAGCTATTCCACAGCATGAGTAGAGATTTTGGGTTGGTTCCCAAGATAGAGCATTTTGCTTGTCTAGTCGATATGTTAGCACGAGCTGGTAAGCTCGATGATGCACTTGATGTTCTAAAGGGAATGCCTATGAAGCCAGACAAGCATATATGGGGGACCCTGTTAGCTGCTGGGCAAGCCTTGCAGAATGAGGAAGTTGCCAAGTTGGCTGCTGAAAATCTTGTGTGCTTAGAGCCTCAAAATGCTGGACTCTATGTAACATTATCAAACATATACGCCAAGGATGGAAGATGGGATGATGCAATGAGGACAAGAAGGTTGATGGAAAGCCGAGGGTTGATGAAACCAACAGGAAGTAGTTGGATAGGACAGGAAAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_332499.p1 GENE.S_Transcript_332499~~S_Transcript_332499.p1 ORF type:complete len:640 (+),score=121.79,PPR|PF01535.16|9.7,PPR|PF01535.16|0.0017,PPR|PF01535.16|0.0064,PPR|PF01535.16|3.1e-07,PPR|PF01535.16|0.00075,PPR|PF01535.16|4.7e-05,PPR|PF01535.16|3,PPR|PF01535.16|0.43,PPR|PF01535.16|0.016,PPR|PF01535.16|0.00055,PPR|PF01535.16|0.0088,PPR|PF01535.16|0.079,PPR|PF01535.16|0.019,PPR_2|PF13041.2|59,PPR_2|PF13041.2|5.6e-08,PPR_2|PF13041.2|0.048,PPR_2|PF13041.2|3.2e-07,PPR_2|PF13041.2|3.1e-05,PPR_2|PF13041.2|0.0009,PPR_2|PF13041.2|3.6e+02,PPR_2|PF13041.2|1.1e-05,PPR_2|PF13041.2|0.0075,PPR_2|PF13041.2|1.4e-08,PPR_2|PF13041.2|2,PPR_2|PF13041.2|6,PPR_2|PF13041.2|0.82,PPR_1|PF12854.3|9.5,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|0.03,PPR_1|PF12854.3|3,PPR_1|PF12854.3|3e-06,PPR_1|PF12854.3|2e-05,PPR_1|PF12854.3|7.3e+03,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|0.058,PPR_1|PF12854.3|0.002,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|0.00052,PPR_1|PF12854.3|8.4,PPR_3|PF13812.2|3.1e+03,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|0.47,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|0.00064,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|0.0025,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|4,PPR_3|PF13812.2|6.8e+02,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|8.8,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|0.34,PPR_3|PF13812.2|0.0091,TPR_14|PF13428.2|3.3e+03,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|4.2e+03,TPR_14|PF13428.2|2.5e+02,TPR_14|PF13428.2|36,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|1.1e+02,TPR_14|PF13428.2|7.2e+02,TPR_14|PF13428.2|17,TPR_14|PF13428.2|6.5e+02,TPR_19|PF14559.2|1.6e+03,TPR_19|PF14559.2|1e+02,TPR_19|PF14559.2|70,TPR_19|PF14559.2|53,TPR_19|PF14559.2|1 S_Transcript_332499:132-2051(+)
MRSKWHLLSHFSSLPITDFSFLSSSLLTHLLQLCSNSRALLQTKQTHQQIIQQGLHKDRFIITKLVQSYAECNHLDYAHKLFDELSEPNVFAWTTLLAFYSKNGLFNECLRVYGAMRFQGVLPDQYVFPKVLRACAQLSVLETGTMVHKDVIVRGVEFNLQVCSSLIDMYAKCEEIESARRVFDNMMVRDLLSWNAMISGYVANGFPELAAELFGSMRVDGIEPDLVTCNTVMDAYFQMGKREEALRVFEQTVEPNIISWTTLVSGYARNGDHEASLRTFRDMMNYMVFIPDLDSPSNAMVSCRHMKALRNGQEIHAYGMKTHSHCSFYKSVGPALLTMYSRCGRIHDMRNVFELMDIFDVVTWNAMIFGLIDLAMGHPALEAFRKMQVLRIKTNQTTLSTILPVCSLKSGKQIHAYIIRSNFLSVVPVLNALISMHCKCGSINTANLVFSKMSKRDLVSWNTIIGGFPMHGKGDSALQLLKKMVASGLYPDSVTLTSALAACSHSGLFEEGIELFHSMSRDFGLVPKIEHFACLVDMLARAGKLDDALDVLKGMPMKPDKHIWGTLLAAGQALQNEEVAKLAAENLVCLEPQNAGLYVTLSNIYAKDGRWDDAMRTRRLMESRGLMKPTGSSWIGQEN*

Click here to download the sequence:
Link to NCBI Protein BLAST