Transcript Information: S_Transcript_333075.p1


Annotated TAIR IDAT3G48810.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18097048-18099027 | Forward length=659
E-Value4.1E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29245056302396
Replicate 20.24244823689577
Replicate 30.20266742949012
Condition 2: 8 Hour
Replicate 10
Replicate 21.4750669432787
Replicate 30.46848016714245
Condition 3: 24 Hour
Replicate 10.48010732946361
Replicate 20.49810574893071
Replicate 31.1086612925326


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_333075.p1 GENE.S_Transcript_333075~~S_Transcript_333075.p1 ORF type:internal len:91 (-),score=14.99,PPR_2|PF13041.2|6.9,PPR_2|PF13041.2|1.2e-14,PPR_2|PF13041.2|7.4e-15,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|4e-16,PPR_1|PF12854.3|1.4e+02,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|5.2,PPR_3|PF13812.2|8.9e-10,PPR|PF01535.16|5.7e+02,PPR|PF01535.16|94,PPR|PF01535.16|1.3e-10 S_Transcript_333075:3-272(-)
AGCCTTGAAAATGTTTTATGGAGTAGGATGCAAGATTTTGGTTGCAAGCCGACTGTTAAGATTTATAATCATGTGTTGGATGCTTTGCTTGGTGAGAATAGGTTCCGGATGATAAATCCGATTTATAGCAATATGAAGAAAGATGGGTTAGTGCCCAATGTGTTTACTTATAACATTCTCTTGAAAGCTTTGTGCAAGAATGGTCGGGTTGATGGTGCTCGTAAGCTGCTTAAGGAAATGTCTAATAAGGGTTGCTCCCCTGATAATGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_333075.p1 GENE.S_Transcript_333075~~S_Transcript_333075.p1 ORF type:internal len:91 (-),score=14.99,PPR_2|PF13041.2|6.9,PPR_2|PF13041.2|1.2e-14,PPR_2|PF13041.2|7.4e-15,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|4e-16,PPR_1|PF12854.3|1.4e+02,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|5.2,PPR_3|PF13812.2|8.9e-10,PPR|PF01535.16|5.7e+02,PPR|PF01535.16|94,PPR|PF01535.16|1.3e-10 S_Transcript_333075:3-272(-)
SLENVLWSRMQDFGCKPTVKIYNHVLDALLGENRFRMINPIYSNMKKDGLVPNVFTYNILLKALCKNGRVDGARKLLKEMSNKGCSPDNV

Click here to download the sequence:
Link to NCBI Protein BLAST