Transcript Information: S_Transcript_3331.p1


Annotated TAIR IDAT4G19610.1
Annotated Gene Namenucleotide binding;nucleic acid binding;RNA binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10677482-10681623 | Forward length=816
E-Value1.1E-289
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.86347354872
Replicate 216.127925780282
Replicate 316.218039330452
Condition 2: 8 Hour
Replicate 117.955515610807
Replicate 217.190431343192
Replicate 316.996110092754
Condition 3: 24 Hour
Replicate 116.284846799985
Replicate 212.493802039072
Replicate 313.447700394525


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_3331.p1 GENE.S_Transcript_3331~~S_Transcript_3331.p1 ORF type:complete len:829 (+),score=198.11,RRM_1|PF00076.18|1e-15,RRM_1|PF00076.18|2.8e-21,RRM_1|PF00076.18|5.7e-08,RRM_1|PF00076.18|3e-09,RRM_1|PF00076.18|1.2e-18,RRM_6|PF14259.2|7.6e-11,RRM_6|PF14259.2|7.7e-14,RRM_6|PF14259.2|5.2e-08,RRM_6|PF14259.2|9.1e-10,RRM_6|PF14259.2|1.9e-12,RRM_5|PF13893.2|0.0002,RRM_5|PF13893.2|5.6e-09,RRM_5|PF13893.2|0.2,RRM_5|PF13893.2|2.7e+02,RRM_5|PF13893.2|1.7e-10,RRM_occluded|PF16842.1|30,RRM_occluded|PF16842.1|0.52,RRM_occluded|PF16842.1|5.6,RRM_occluded|PF16842.1|1.8e+03,RRM_occluded|PF16842.1|3e+02,Nup35_RRM_2|PF14605.2|0.066,Nup35_RRM_2|PF14605.2|19,Nup35_RRM_2|PF14605.2|2.6e+02,Nup35_RRM_2|PF14605.2|49 S_Transcript_3331:329-2815(+)
ATGCGGTACTTCAGGTCTCGAATTTATGTGAAAGATTTGCCAAAACATGCAACGGAAGATCGTCTAAGGGAGTTCTTTTCAGAGAAAGGCGAGATTACTGACTGCAAGCTCATTCGCACCAGAGATGGCAAGAGCAGGCAGTTTGCGTTTATTGGGTACCGGACCGAGCAAGAAGCGGAAGAGGCTATTAGATACTTCAACAAGTCGTATTTGGACACCTCCAGAATTAGTTGTGAGTTTGCTCTGAAACAAGGGGATCCAAATATTCCCTGTCCTCAGAGTTGGTATTCTAAGAAGAAAGAAGAGAAGACTCAAGGGCAAAACCACAACCAAGTTTCTGATGGCAAAGATAAAACTGAGAAGAGTGCAAACGTAAGTCAGGAGAATGGTGATCCCAAATTTGTAGAGTTTTTTCAAGTTATGCAGCCACGAAGCAAATCAAAGTTGTGGGAAAATGATCTAGTAGCTCCCACTCTTGAGCATATAGCTGCAGACAGTGAGGAGTCCACTCAGTTACAGCAAGAAGAGAAGGGGTCAATGAAAAAGCTTAACATGGCTAAGACTGCTCAGGATGATGGAATGCATGATGAAAACACTGACGGACCACCAAAACTTGCCCATGATTTAGAAGTCTCGGACATGGAATACTTTCAACATCGAGTTAAAAAGGAATGGTCTGATTCAGAAAGTGATAGTGATGATGAAAATGGAATTGATATGGATCAGCATGATGATAACAGTGGTCCTGAGGGTAATCAAAAAGAGCTGGGTGTTCAGAATTTCACTGCTTCTGTGGGACAGAACACTCTAAAAGGCATTGGTGTGCTTGAAGAATCTGGTGGTGAATTTGTGAGCTCTGTAAATCTATCTAGTCCACAAGATGCAATGCTTCAGCCTGGTCGGCTTTATGTCCGCAATCTTCCCTATGCTGCAACTGAGGATGAGCTGGCAGATCTCTTCAGCAAATTTGGGAACATAGCAGATGTCCATCTTGTCATTGATAAAGAGACAAAACAGTCTAAAGGTTTTGCTTATGTTCTTTATAGTGCTCCAGAAGCTGCTTCTAGGGCCTTAGAAGAATTGGATCATTCAACCTTTCAAGGTAGATTATTGCATGTCATGCCAGCGAAAGTAAAAGATGCTTTTCAAGATCAAGAAGCCCATTTATCTGTGGGCAAAGCTAAGACATTTAAGCAGCGGAGGGAGGAAGAGAGAAAGACATCAGAAGCAGCTGGAAATACTCTAGCATTGAACACTTTGTATATGCGTGCTGACACTGTTGTTGAAAATATTGCTAGGAAATATGGGGTTAGTAAAAGTGAACTGCTAGATCGTGAAGCTGATGATCTTGCTGTACGCATCGCTCTTGGAGAAACTCAAATTATTGCAGAAACCAAGAAGGCTCTAGCAAATGCTGGAATTAATGTTACATCCTTGGAGGAATTTGCATCTGGAAAAACTGAAGGGGTAAAAAGAAGTAACCATGTGTTACTGGTCAAGAACTTGCCTTACAGTTCAACAGAAGGTGAACTCTCAAATATGTTCGGCAAATTCGGGAGTATTGACAAAATTATTCTTCCTCCAACGAGGACATTGGCCTTGGTAATCTTTCTTGAACCAGCTGAAGCCCGTGCTGCTTTTAGAGGCCTGGCTTACAAACGTTACAAGGATGCTCCTTTGTATTTGGAATGGGCTCCCAGCAATATCCTAAGTCCAGATGCAGCGCCTGACAACAACTCAAAGAATAACATGGTTGGTGACCAAGAAGCCAAGAAGTTTATTCTGGAGCAGGCAGTCGAAGGGATATCTCAAGCTGAAATTGATCCTGATAGAGTTGAGTCACGATCACTTTACATCAAGAACTTGTATTTTAGGACATCTGATGAAAGGTTAAAGAAGCATCTGACTGAAAACATGAAAGAAGGAAAGGTTCTGAGCGTCAGGATAAAGAAGCACTTGAAAAATGGGAAGAATCTATCAATGGGTTTTGGATTTGTGGAATTTGATTCTATGGAGACAGCATCAAATGTTTGCCGGGATTTACAGGGTACTGTTTTAGATGGGCATGCGTTAATTATGCAACTTTGCCACATCAAGAATGATGAAAATGTTCTCAAGAAAACCGACAACGATAAAAGTTCCACAAAACTAATAGTAAGAAATGTCGCATTTGAGGCAACGGAGAAGGATCTTAGGCAGCTGTTCAACCCATTTGGTCAGATAAAAAGTTTAAGGCTCCCAATGAAGCTTGGGAAACACAGAGGTTTTGCATTTGTGGAATTTGTCACTAAACAAGAAGCGCAAAATGCCCTTAAAGCTCTGTCAAGTACCCATTTGTATGGGCGACACTTGGTTCTAGAACGAGCGAAGGAGGGTGAAACGTTAGAAGAACTAAGAAAACGAACAGCTGCTCAATTTGCCACTGACCAAGACGATTTCACAAATCCTACGAGAATTTCGAAGAAAAGAAAGGTCACAACTTATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_3331.p1 GENE.S_Transcript_3331~~S_Transcript_3331.p1 ORF type:complete len:829 (+),score=198.11,RRM_1|PF00076.18|1e-15,RRM_1|PF00076.18|2.8e-21,RRM_1|PF00076.18|5.7e-08,RRM_1|PF00076.18|3e-09,RRM_1|PF00076.18|1.2e-18,RRM_6|PF14259.2|7.6e-11,RRM_6|PF14259.2|7.7e-14,RRM_6|PF14259.2|5.2e-08,RRM_6|PF14259.2|9.1e-10,RRM_6|PF14259.2|1.9e-12,RRM_5|PF13893.2|0.0002,RRM_5|PF13893.2|5.6e-09,RRM_5|PF13893.2|0.2,RRM_5|PF13893.2|2.7e+02,RRM_5|PF13893.2|1.7e-10,RRM_occluded|PF16842.1|30,RRM_occluded|PF16842.1|0.52,RRM_occluded|PF16842.1|5.6,RRM_occluded|PF16842.1|1.8e+03,RRM_occluded|PF16842.1|3e+02,Nup35_RRM_2|PF14605.2|0.066,Nup35_RRM_2|PF14605.2|19,Nup35_RRM_2|PF14605.2|2.6e+02,Nup35_RRM_2|PF14605.2|49 S_Transcript_3331:329-2815(+)
MRYFRSRIYVKDLPKHATEDRLREFFSEKGEITDCKLIRTRDGKSRQFAFIGYRTEQEAEEAIRYFNKSYLDTSRISCEFALKQGDPNIPCPQSWYSKKKEEKTQGQNHNQVSDGKDKTEKSANVSQENGDPKFVEFFQVMQPRSKSKLWENDLVAPTLEHIAADSEESTQLQQEEKGSMKKLNMAKTAQDDGMHDENTDGPPKLAHDLEVSDMEYFQHRVKKEWSDSESDSDDENGIDMDQHDDNSGPEGNQKELGVQNFTASVGQNTLKGIGVLEESGGEFVSSVNLSSPQDAMLQPGRLYVRNLPYAATEDELADLFSKFGNIADVHLVIDKETKQSKGFAYVLYSAPEAASRALEELDHSTFQGRLLHVMPAKVKDAFQDQEAHLSVGKAKTFKQRREEERKTSEAAGNTLALNTLYMRADTVVENIARKYGVSKSELLDREADDLAVRIALGETQIIAETKKALANAGINVTSLEEFASGKTEGVKRSNHVLLVKNLPYSSTEGELSNMFGKFGSIDKIILPPTRTLALVIFLEPAEARAAFRGLAYKRYKDAPLYLEWAPSNILSPDAAPDNNSKNNMVGDQEAKKFILEQAVEGISQAEIDPDRVESRSLYIKNLYFRTSDERLKKHLTENMKEGKVLSVRIKKHLKNGKNLSMGFGFVEFDSMETASNVCRDLQGTVLDGHALIMQLCHIKNDENVLKKTDNDKSSTKLIVRNVAFEATEKDLRQLFNPFGQIKSLRLPMKLGKHRGFAFVEFVTKQEAQNALKALSSTHLYGRHLVLERAKEGETLEELRKRTAAQFATDQDDFTNPTRISKKRKVTTY*

Click here to download the sequence:
Link to NCBI Protein BLAST