Transcript Information: S_Transcript_33344.p1


Annotated TAIR IDAT5G64920.1
Annotated Gene NameCOP1-interacting protein 8
Annotated Gene Symbol(s)CIP8
Annotation TypeOrtholog
Chromosome Positionchr5:25944338-25945342 | Reverse length=334
E-Value3.2E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 157.166109146738
Replicate 249.913479752196
Replicate 353.412079826532
Condition 2: 8 Hour
Replicate 176.383670772276
Replicate 273.798046162215
Replicate 364.279737842554
Condition 3: 24 Hour
Replicate 161.960033173322
Replicate 255.86482385962
Replicate 359.812276732133


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_33344.p1 GENE.S_Transcript_33344~~S_Transcript_33344.p1 ORF type:complete len:385 (+),score=57.95,zf-RING_2|PF13639.2|1.1e+04,zf-RING_2|PF13639.2|2.4e-11,zinc_ribbon_9|PF14369.2|4e-11,zinc_ribbon_9|PF14369.2|4.7e+03,zinc_ribbon_9|PF14369.2|1e+02,zinc_ribbon_9|PF14369.2|2.1e+03,zf-RING_11|PF17123.1|4.5e-08,zf-RING_11|PF17123.1|6.4e+03,zf-rbx1|PF12678.3|2.6e-06,zf-C3HC4_2|PF13923.2|2.1e+03,zf-C3HC4_2|PF13923.2|9.4e-07,zf-C3HC4|PF00097.21|1.6e+04,zf-C3HC4|PF00097.21|2.2e-06 S_Transcript_33344:362-1516(+)
ATGTCCGAGACCCCCTCGCCGCCATCTCCACCACCGTCAACGCCGCCGTTACCTCCACCACCATCGTCTCAACAATACTGGTGTTACCACTGCGACAAGCGAGTTGCAATCGAAACCCTACCGGATCAGCCTGACGTCATCTGCAACGAGTGCAAGTTCGGTTTCGTCGAGTCTATCCTTCCTGCTTCAATCTCCTCTCCACCGCCTCTTTATCCTCCTTCTCGAAGTTCCGATCATAGCGGCGGCCTTCTTCTCGGCGGTTCTGGCGGCGATGACACAACCCTAGGCAACCAGTTCCTCCAAGTCCTCCGTCTTCTCGCCCAGGTGGCGCATGAGGACGAATCTCCACCGCCTCCACCACCACCGCCTCCTCCTCGCCCTCTCAATCCGTCCGATCCTTCTCCCTCCGACGACGACTTTCTCCGCATCGAGATCGATGGTTGGGATAACGACCACGAGAACCACAACGATGACGTGGACCGGGAGAATGATGACGTGGATGAGGATGAGGATGACGACGACCGCAGCGTGGATATCGAAGGGGAATCTGATGACGACGACGATGACGCGGAGGAGAGAGAAGAGGATATCCGGAGACGGAGGCGAGACGTGCTCCGTCTCCGTCTCCGAGACTTTGCTACGCGTGCTCGTAGCGAAGGGAGGAATCGGATCCTCGATTGGGCGGAGATTCTGATGGGATTAGAAGACAATTCGATCGAATTCCGGTTCGAGATGCCGGAAACCGACAGGTACATTGGGAACCCCGGGGATTACGTGGACGCAGCCGAGTACGAGGCATTGTTGCAGAATCTGGCTGAGGCTGAGGGCAGGAGGGGCGCCCCACCGGCCTCGAAGACGGCCATCGAGAGTCTCAAGACGGTGGAGATCAAATCGGAGGAGGAGAGTTACGTTTGTGCTATCTGTAAGGATAATGTCAACGTTGGGGAGTTTGTTAAGGAGATGCCTTGTGGACATGGTTATCATGGTGATTGTATTGTGCCTTGGCTTGGGGCTAGGAACTCTTGCCCCGTTTGTCGGTTCGAGTTGCAGACCGATGATCCGGATTATGAGGAGGAGAGGAAGAAGCGGTCCAGTGGGTCCTCCGGTGGTGGCGGCAGTGGGAACTCTTCGACTTCAGCTTCAGCTTCAGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_33344.p1 GENE.S_Transcript_33344~~S_Transcript_33344.p1 ORF type:complete len:385 (+),score=57.95,zf-RING_2|PF13639.2|1.1e+04,zf-RING_2|PF13639.2|2.4e-11,zinc_ribbon_9|PF14369.2|4e-11,zinc_ribbon_9|PF14369.2|4.7e+03,zinc_ribbon_9|PF14369.2|1e+02,zinc_ribbon_9|PF14369.2|2.1e+03,zf-RING_11|PF17123.1|4.5e-08,zf-RING_11|PF17123.1|6.4e+03,zf-rbx1|PF12678.3|2.6e-06,zf-C3HC4_2|PF13923.2|2.1e+03,zf-C3HC4_2|PF13923.2|9.4e-07,zf-C3HC4|PF00097.21|1.6e+04,zf-C3HC4|PF00097.21|2.2e-06 S_Transcript_33344:362-1516(+)
MSETPSPPSPPPSTPPLPPPPSSQQYWCYHCDKRVAIETLPDQPDVICNECKFGFVESILPASISSPPPLYPPSRSSDHSGGLLLGGSGGDDTTLGNQFLQVLRLLAQVAHEDESPPPPPPPPPPRPLNPSDPSPSDDDFLRIEIDGWDNDHENHNDDVDRENDDVDEDEDDDDRSVDIEGESDDDDDDAEEREEDIRRRRRDVLRLRLRDFATRARSEGRNRILDWAEILMGLEDNSIEFRFEMPETDRYIGNPGDYVDAAEYEALLQNLAEAEGRRGAPPASKTAIESLKTVEIKSEEESYVCAICKDNVNVGEFVKEMPCGHGYHGDCIVPWLGARNSCPVCRFELQTDDPDYEEERKKRSSGSSGGGGSGNSSTSASASV*

Click here to download the sequence:
Link to NCBI Protein BLAST