Transcript Information: S_Transcript_333671.p1


Annotated TAIR IDAT2G05100.1
Annotated Gene Namephotosystem II light harvesting complex gene 2.1
Annotated Gene Symbol(s)LHCB2.1, LHCB2
Annotation TypeOrtholog
Chromosome Positionchr2:1823449-1824331 | Reverse length=265
E-Value6.4E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.50933973655848
Replicate 22.2168353143914
Replicate 30.61769929466605
Condition 2: 8 Hour
Replicate 10.61221216221434
Replicate 20
Replicate 30.61193820875545
Condition 3: 24 Hour
Replicate 10
Replicate 21.6265893475847
Replicate 30.60339819150995


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_333671.p1 GENE.S_Transcript_333671~~S_Transcript_333671.p1 ORF type:internal len:209 (+),score=-25.88,Chloroa_b-bind|PF00504.17|5.2e-28 S_Transcript_333671:2-625(+)
GTCAATCTCCAAGCAGCAACTCTCCAGTCTTTCCCTGTCACAAGCCTCAAGATGCAGTCCTCATTCGTTGGCAACACGAAGACCATGCGGAGCCAGGTCGCCGTCAAGGCGACTGGCAGCAACCGCCAGGCCACCACCATGCGCCGCACGACCAAGGGCAAGAAGACCGCGTCAAGCAGCGCCTCCGTGTGGTACGGCCCTGACCGCCCAATGTTCCTGGGTCCTTTCTCCGAGGAGGCGTGCCCGCCATACCTCAACGGCGAGTTCCCCGGTGACTACGGCTGGGACACCGCCGGCCTGTCCGCGGACCCGGAGACGTTCCGCCGCTACCGCGAGCTCGAGGTCATCCACGCCCGGTGGGCCATGCTCGGCGCCCTTGGCTGCGTGACCACCGAGATCCTGCAGCGCAACGGCACCCCGATCGAGGGCGTGTGGTTCAAGGCTGGCGCGTCCATCTTCCAGCGCGATGGCCTGAACTACCTCGGCAACCCGAGCCTCATCCACGCGCAGAGCATCCTCGCCATCCTCGGCTGCCAGGTCGTGCTGATGGGCGCCATCGAGGGCTACCGCGTCAACGGTGGCCCCGCGGGCGAGGGCCTCGACGCGCTGTACCCGGGCGGCGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_333671.p1 GENE.S_Transcript_333671~~S_Transcript_333671.p1 ORF type:internal len:209 (+),score=-25.88,Chloroa_b-bind|PF00504.17|5.2e-28 S_Transcript_333671:2-625(+)
VNLQAATLQSFPVTSLKMQSSFVGNTKTMRSQVAVKATGSNRQATTMRRTTKGKKTASSSASVWYGPDRPMFLGPFSEEACPPYLNGEFPGDYGWDTAGLSADPETFRRYRELEVIHARWAMLGALGCVTTEILQRNGTPIEGVWFKAGASIFQRDGLNYLGNPSLIHAQSILAILGCQVVLMGAIEGYRVNGGPAGEGLDALYPGGD

Click here to download the sequence:
Link to NCBI Protein BLAST