Transcript Information: S_Transcript_333693.p1


Annotated TAIR IDAT5G39510.1
Annotated Gene NameVesicle transport v-SNARE family protein
Annotated Gene Symbol(s)VTI11, ATVTI1A, ATVTI11, ZIG, SGR4, VTI1A, ZIG1
Annotation TypeOrtholog
Chromosome Positionchr5:15822035-15823591 | Forward length=221
E-Value3.4E-109
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.508549484248
Replicate 244.724568876772
Replicate 350.321130581046
Condition 2: 8 Hour
Replicate 152.879248388185
Replicate 255.980236641488
Replicate 349.769128344662
Condition 3: 24 Hour
Replicate 142.997847594608
Replicate 248.096505109986
Replicate 347.248535672932


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_333693.p1 GENE.S_Transcript_333693~~S_Transcript_333693.p1 ORF type:complete len:221 (+),score=48.51,V-SNARE|PF05008.11|2.3e-24,V-SNARE|PF05008.11|7.1e+03,V-SNARE_C|PF12352.4|9.8e+02,V-SNARE_C|PF12352.4|2.5e+03,V-SNARE_C|PF12352.4|9e-23,Sec20|PF03908.9|9.5e+02,Sec20|PF03908.9|3.6e-07 S_Transcript_333693:298-960(+)
ATGAGTCAAGTATTTGATACGTACGAACGTCAATATTGCGAGCTTTCGGCGAATTTGACTCGGAAATGTACCTCTGCTGGTCTTCTCAATGGAGAGCAGAAGAAGCAAAAAATATCTGAAATTAAAGCCGGTTTGGATGATGCAGAAGCTCTGATTCGGAAAATGGACCTAGAGGCTAGAACATTACAGCCAAACGTGAAGGCCATGGTTCTTGCCAAACTGAGAGAGTACAAGAATGACCTGAACAACCTGAAAGCTGAGGTTAAAAGATTATCGACAACTGATAGCCAGGCTGCTCGAGATGCATTGCTGGAATCTGGAATGGCTGATGCATTGATGGCTTCTGCTGATCAAAGAGGGCGCTTATTGATGTCAACGGAGAGGTTGAACCATTCCACTGACAGAATCAAGGAAAGCAGAAGAACAATGCTAGAGACCGAGGAGCTTGGTGTTTCTATACTGCAAGATTTGCATCAGCAACGCCAGTCCCTCCTACATGCTCATAACACACTTCATGGGGTTGATGAGAACATTGGCAGAAGCAGGAAAATATTGACTGCAATGTCTAGGAGGATGAACCGGAATAAATGGATTATTGGCTCTATTATTGCAGTCCTGGTCCTTGCGGTTCTTTTGATCCTTTACTTCAAGTTACGTCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_333693.p1 GENE.S_Transcript_333693~~S_Transcript_333693.p1 ORF type:complete len:221 (+),score=48.51,V-SNARE|PF05008.11|2.3e-24,V-SNARE|PF05008.11|7.1e+03,V-SNARE_C|PF12352.4|9.8e+02,V-SNARE_C|PF12352.4|2.5e+03,V-SNARE_C|PF12352.4|9e-23,Sec20|PF03908.9|9.5e+02,Sec20|PF03908.9|3.6e-07 S_Transcript_333693:298-960(+)
MSQVFDTYERQYCELSANLTRKCTSAGLLNGEQKKQKISEIKAGLDDAEALIRKMDLEARTLQPNVKAMVLAKLREYKNDLNNLKAEVKRLSTTDSQAARDALLESGMADALMASADQRGRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTLHGVDENIGRSRKILTAMSRRMNRNKWIIGSIIAVLVLAVLLILYFKLRH*

Click here to download the sequence:
Link to NCBI Protein BLAST