Transcript Information: S_Transcript_333990.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28463102925327
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.23927110844627
Replicate 30
Condition 3: 24 Hour
Replicate 10.23363511754646
Replicate 20.84837797344616
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_333990.p1 GENE.S_Transcript_333990~~S_Transcript_333990.p1 ORF type:internal len:187 (-),score=17.75,zf-RVT|PF13966.2|8.5e-21,zf-RVT|PF13966.2|8.2e+03 S_Transcript_333990:3-560(-)
GGGGTGTTGTTCTCTGATTTGGAGGATAAACGGATTTGGAAAGCGGATACCCATGGGGTCTTCTCTTGTGCTTCTTTCCTGCGCTCTTTACAGAGTCAATCAGGAGGGTCCACGTTTCCCATTGCGAGGCTTCTGTGGAAGGCAAAAGCCCCCCTCAAGGTGAGGGCGTTTGTTTGGACCTTGACCTTGGGAAAGCTTAACACCAATGATATGCGCCAACGTAGGCGGCCTCAGTGGTGCCTCTCGCCTGATATTTGTCTTTTGTGCCACAAGAGTGGGGAGACAGCTGCTCACCTCTTTCTCCACTGCCCGGTCGCACGTTCTATTTGGGCCTTGCTCTTTGGAATCAGGAGGGAAGCCTTTGTTTGCCCGTCTACTGTATCGGAGTTCCTGGAAGGACGCTTTTGGGGGTTTGGAAGAGATAAGGAGCTGGGTGTATTATGGCTTAATGCAATTTTTGCTACTTTGTGGTGTATCTGGTTGGAGCGCAATGCAAGGGTGTTTCAACGGACTACTCTCCCTACCTCTCTTTTGTGGGATAGGATCACCTACTTAGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_333990.p1 GENE.S_Transcript_333990~~S_Transcript_333990.p1 ORF type:internal len:187 (-),score=17.75,zf-RVT|PF13966.2|8.5e-21,zf-RVT|PF13966.2|8.2e+03 S_Transcript_333990:3-560(-)
GVLFSDLEDKRIWKADTHGVFSCASFLRSLQSQSGGSTFPIARLLWKAKAPLKVRAFVWTLTLGKLNTNDMRQRRRPQWCLSPDICLLCHKSGETAAHLFLHCPVARSIWALLFGIRREAFVCPSTVSEFLEGRFWGFGRDKELGVLWLNAIFATLWCIWLERNARVFQRTTLPTSLLWDRITYLA

Click here to download the sequence:
Link to NCBI Protein BLAST