Transcript Information: S_Transcript_334050.p1


Annotated TAIR IDAT3G54890.1
Annotated Gene Namephotosystem I light harvesting complex gene 1
Annotated Gene Symbol(s)LHCA1
Annotation TypeHomolog
Chromosome Positionchr3:20339706-20340922 | Reverse length=241
E-Value9E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.55213695508673
Replicate 20.73237475709593
Replicate 30.22957762759669
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.35379000174243
Condition 3: 24 Hour
Replicate 10
Replicate 20.75232569548041
Replicate 30.10465578591334


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_334050.p1 GENE.S_Transcript_334050~~S_Transcript_334050.p1 ORF type:5prime_partial len:241 (+),score=-1.75,Chloroa_b-bind|PF00504.17|1.6e-46 S_Transcript_334050:1-723(+)
CTTCTCTGCCTTGTTCCCGTTGCAGTCGACGCCGCAATGATGTCTCTGTGCCTATCTCGCAGGGCGGTGGTGGTGCGCCCAGGCAGCGCGCGCCCTGCTGTCGCAGCCAACGCAAAGGCTGGAAACTGGCTACCAGGCGCTGACTCTCCGGCGCATCTGGACGGCTCGCTGCCCGGCGACTACGGATTTGACCCTCTGGGGCTGGGCGAGCAGAAGCTCGATCGACTGCGCGAGTCCGAGCTGGTGCATGGCCGCTGGGCCATGCTTGGCGTGGTCGGCTGCCTCCTGCCAGAGGCCCTGGGCCTTGGCAACTGGTTTGAGGCGCCCCTGTGGGCTGTAAACGGCGGCGAGCCCACATACGTGGGCGTGCCCGTGCCCTTCGACATCAAGACCATCATCTTGGTGGAGATCGTGGCGATGGCAGGCGTGGAGCTGCTGCGCAGCCAAGAGAACGAGCCCTTGAAGCGCGCTTACCCGGGCGGTGCTTTTGACCCCATGGGCATGGCGAAGGACGGCAGCGAAGACTTGAAGCTGAAGGAGATCAAGAACGGGCGGCTCGCGATGCTCGCGTTCCTCGGCTTTGTCGCGCAGCACGAAGCCACCGGCAAGGGGCCGCTGCAGAACCTGGCGGACCACCTGTCGAACCCTGCGTACAACAACTTTGCAACGAACGGCGTGTCGCTGCCGCCATCTGCCTTCCCTTTCATTTATGGCATTGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_334050.p1 GENE.S_Transcript_334050~~S_Transcript_334050.p1 ORF type:5prime_partial len:241 (+),score=-1.75,Chloroa_b-bind|PF00504.17|1.6e-46 S_Transcript_334050:1-723(+)
LLCLVPVAVDAAMMSLCLSRRAVVVRPGSARPAVAANAKAGNWLPGADSPAHLDGSLPGDYGFDPLGLGEQKLDRLRESELVHGRWAMLGVVGCLLPEALGLGNWFEAPLWAVNGGEPTYVGVPVPFDIKTIILVEIVAMAGVELLRSQENEPLKRAYPGGAFDPMGMAKDGSEDLKLKEIKNGRLAMLAFLGFVAQHEATGKGPLQNLADHLSNPAYNNFATNGVSLPPSAFPFIYGIV*

Click here to download the sequence:
Link to NCBI Protein BLAST