Transcript Information: S_Transcript_334061.p1


Annotated TAIR IDAT1G66890.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 50S ribosomal protein-related (TAIR:AT5G16200.1); Has 36 Blast hits to 36 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:24957614-24958090 | Forward length=158
E-Value3.6E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2927293561018
Replicate 25.5428683124791
Replicate 33.5431857500513
Condition 2: 8 Hour
Replicate 18.0889411547746
Replicate 27.0531936598153
Replicate 37.1402839267918
Condition 3: 24 Hour
Replicate 13.5511386955153
Replicate 23.3493317600513
Replicate 34.8456144423622


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_334061.p1 GENE.S_Transcript_334061~~S_Transcript_334061.p1 ORF type:complete len:203 (-),score=3.43 S_Transcript_334061:195-713(-)
ATGGCCACGTTGCAGAAATTCAAGCTGCTAGCCACACAGTGCGCCGTCATCGGGAGCCCGGCCCGAAGCCCAACCACAAGCCCCGTCATCCACATCCGACGTCGTAAAACCCTCCGTATGCTTCTCAGCCGTCGCACCACTAACAACGCCGACGTTTTCCACCGCCGATTCCTCCACCCTAACCCTCGCCCTGACAAAACTTCCCTCGAAAAGCGCCCACCGGAGACCGCCAAAGATAACAACCTCGGCGTCCGTCTCAAGCTTAAGGATCTCTTCGTCTCCTCTCCTCCTCCACCGCCGATCATCGGTGATAATTCCAGCAAGGTTCCGGAAGAAGACGATGGACAGAGGCTGTTACCTGCTACCGGAACTTCCTCCGCCGGTGGATTAGAGGTGGCGCGTAGAGTTCCCGGCGGTGGCGCGTCGATTAGGCCGTTATCGGCCACTTTAAGGCAGAGATTGCTTATGAGGAGAATGTGGCGGCCTGTACTCGTCGCGATTCCCGAGCAATCGCCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_334061.p1 GENE.S_Transcript_334061~~S_Transcript_334061.p1 ORF type:complete len:203 (-),score=3.43 S_Transcript_334061:195-713(-)
MATLQKFKLLATQCAVIGSPARSPTTSPVIHIRRRKTLRMLLSRRTTNNADVFHRRFLHPNPRPDKTSLEKRPPETAKDNNLGVRLKLKDLFVSSPPPPPIIGDNSSKVPEEDDGQRLLPATGTSSAGGLEVARRVPGGGASIRPLSATLRQRLLMRRMWRPVLVAIPEQSP*

Click here to download the sequence:
Link to NCBI Protein BLAST