Transcript Information: S_Transcript_33415.p1


Annotated TAIR IDAT5G28050.2
Annotated Gene NameCytidine/deoxycytidylate deaminase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:10044209-10045484 | Reverse length=204
E-Value3.8E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.58170494503127
Replicate 20.84393184099783
Replicate 31.108579764588
Condition 2: 8 Hour
Replicate 12.3306437505063
Replicate 21.222505390149
Replicate 31.5142405402446
Condition 3: 24 Hour
Replicate 12.0293061166126
Replicate 21.1146136840827
Replicate 30.27565075852586


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_33415.p1 GENE.S_Transcript_33415~~S_Transcript_33415.p1 ORF type:5prime_partial len:183 (+),score=42.04,dCMP_cyt_deam_1|PF00383.18|4.8e-24 S_Transcript_33415:3-551(+)
GGAAGCTTCTTTCTTGTCCTTGATGATTGTAATGTTTCCTTCTATTACATGAGTGAAGAACCAGCTCTGCAGGATAGAGACGAAAAATTCTTGATAAAAGCTATTGAGGAAGCCTATATGGGAGTTGAATGTGGAGACGGGCGTCCATTTGGTGCTGTGATTGTCCGTAATGATCAAGTTGTTGTGAGTTGTCACAACATGGTCTTGAAACACAAAGACCCAACTGCACATGCTGAGCTCACCGCTATAAGAGAGGCCTGTAAAAAGCTGGATCGAATTGAGCTGTCAGACTGTGAAATATATGCTTCTTGCGAACCTTGTCCAATGTGCTTTGGTGCTATACATCTTTCAAGAATCAAGAGGTTAGTGTATGGGGCGAAAGCTGAAGCAGCGGTAGCAATTGGGTTTGATGATTTCATCGCTGATGCATTGAGGGGAACTGGGGTGTATCAGAAGGCTAACCTGGAGATCAAAAAGGCTGATGGGACTCAGGCTGTGATGGCCGAGCAAGTTTTTGAAAAAACCAAGGCCAAGTTTACAATGTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_33415.p1 GENE.S_Transcript_33415~~S_Transcript_33415.p1 ORF type:5prime_partial len:183 (+),score=42.04,dCMP_cyt_deam_1|PF00383.18|4.8e-24 S_Transcript_33415:3-551(+)
GSFFLVLDDCNVSFYYMSEEPALQDRDEKFLIKAIEEAYMGVECGDGRPFGAVIVRNDQVVVSCHNMVLKHKDPTAHAELTAIREACKKLDRIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAVAIGFDDFIADALRGTGVYQKANLEIKKADGTQAVMAEQVFEKTKAKFTMY*

Click here to download the sequence:
Link to NCBI Protein BLAST