Transcript Information: S_Transcript_33418.p1


Annotated TAIR IDAT5G28050.2
Annotated Gene NameCytidine/deoxycytidylate deaminase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:10044209-10045484 | Reverse length=204
E-Value4.7E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 148.553490803116
Replicate 254.651719171096
Replicate 347.866643270414
Condition 2: 8 Hour
Replicate 144.115883785825
Replicate 250.208576336486
Replicate 347.757261618794
Condition 3: 24 Hour
Replicate 153.028037786328
Replicate 249.825784228916
Replicate 350.251554120117


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_33418.p1 GENE.S_Transcript_33418~~S_Transcript_33418.p1 ORF type:5prime_partial len:262 (+),score=55.25,dCMP_cyt_deam_1|PF00383.18|6.4e-23 S_Transcript_33418:1-786(+)
AATCACACTACCAAACAAGATTCCATCTTTCTTCAATACTTTAATGCTATAAAATTAGTGGACTACCTTTGCTTTCCCTCTACCCTCTTTCCCTTTCTCTCTCTTCTTCTTCTTCTTCTTGTCTTTCTATTTCTACTTTCAAACTCATCTTTTTTCAATTTCTTGGATACCCATTTGAAGAAAAAAACACAACTTCTTTCTTCTTTGATCTGCATATTTTCCAATATGGGTGATGCTAATGTGGTTGAAGCAAAAGATGGAACCATCTCTGTAGCTTCTGCATTTGCTGGTCATCAAGAAGCTGTACAGGATAGAGACCACAAATTCTTGACAAAAGCTATTGAGGAAGCCTATAAGGGGGTTGAATGTGGACACGGGGGTCCTTTTGGTGCTGTCGTCGTTCGTAATGATGAAGTAGTTGTGAGCTGTCACAACATGGTGTTGGAATACACAGACCCAACTGCACATGCAGAGGTCACCGCTGTACGAGAGGCATGTAAAAAGCTGGATCGAATTGAGCTGTCAGACTGTGAAATATATGCTTCTTGCGAACCTTGTCCAATGTGCTTTGGTGCTATACATCTTTCAAGAATCAAGAGGTTAGTGTATGGGGCGAAAGCTGAAGCAGCGGTAGCAATTGGGTTTGATGATTTCATCGCTGATGCATTGAGGGGAACTGGGGTGTATCAGAAGGCTAACCTGGAGATCAAAAAGGCTGATGGGACTCAGGCTGTGATGGCCGAGCAAGTTTTTGAAAAAACCAAGGCCAAGTTTACAATGTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_33418.p1 GENE.S_Transcript_33418~~S_Transcript_33418.p1 ORF type:5prime_partial len:262 (+),score=55.25,dCMP_cyt_deam_1|PF00383.18|6.4e-23 S_Transcript_33418:1-786(+)
NHTTKQDSIFLQYFNAIKLVDYLCFPSTLFPFLSLLLLLLVFLFLLSNSSFFNFLDTHLKKKTQLLSSLICIFSNMGDANVVEAKDGTISVASAFAGHQEAVQDRDHKFLTKAIEEAYKGVECGHGGPFGAVVVRNDEVVVSCHNMVLEYTDPTAHAEVTAVREACKKLDRIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAVAIGFDDFIADALRGTGVYQKANLEIKKADGTQAVMAEQVFEKTKAKFTMY*

Click here to download the sequence:
Link to NCBI Protein BLAST