Transcript Information: S_Transcript_334497.p1


Annotated TAIR IDAT1G18530.1
Annotated Gene NameEF hand calcium-binding protein family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6376783-6377256 | Forward length=157
E-Value2.5E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.8685079646808
Replicate 24.751985443157
Replicate 34.3505941530545
Condition 2: 8 Hour
Replicate 110.608014670574
Replicate 27.9161925955956
Replicate 310.712579821991
Condition 3: 24 Hour
Replicate 15.2651770464509
Replicate 24.9976610142715
Replicate 34.9150650635611


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_334497.p1 GENE.S_Transcript_334497~~S_Transcript_334497.p1 ORF type:5prime_partial len:195 (+),score=36.48,EF-hand_1|PF00036.28|0.00021,EF-hand_1|PF00036.28|0.00018,EF-hand_1|PF00036.28|8.1e-06,EF-hand_1|PF00036.28|1.5e-08,EF-hand_7|PF13499.2|1.4e-10,EF-hand_7|PF13499.2|5.8e-16,EF-hand_6|PF13405.2|8.4e-06,EF-hand_6|PF13405.2|0.0069,EF-hand_6|PF13405.2|1.5e-05,EF-hand_6|PF13405.2|1.1e+03,EF-hand_6|PF13405.2|0.0035,EF-hand_5|PF13202.2|0.00018,EF-hand_5|PF13202.2|0.017,EF-hand_5|PF13202.2|0.00044,EF-hand_5|PF13202.2|6.4e-06,EF-hand_8|PF13833.2|0.00034,EF-hand_8|PF13833.2|0.00013,EF-hand_8|PF13833.2|0.53,EF-hand_8|PF13833.2|1.1e-08,SPARC_Ca_bdg|PF10591.5|0.0044,SPARC_Ca_bdg|PF10591.5|0.3,EF-hand_9|PF14658.2|0.075,EF-hand_9|PF14658.2|0.45 S_Transcript_334497:2-586(+)
ATTGAACCCCCATTTCCATTTCCATTTCCATTTCTTATCAAACCCCTCTTCATCTTCATAAAAAAAAAAAATCTCATGTCAACCCTAAAAACAGAGAAACTAAACCAACTGAGACACATATTCAATAGATTCGACATGGACTCAGATGGGTCCATAACCCAGCTGGAGCTGGCGGCGCTTCTCCGGTCCCTAGGGGTGAAACCAACAGGGGACCAAATCTATGCATTGTTAACCAACATGGATTCAAATGGAAATGGGTACATTGAGTTCGAGGAGCTAGCAGAAGCCATGCTTCCGGAGCTCGAAAACCATGATATTTTGATCAACCAGGAGCAGCTGCTGGAGGTGTTTCGCTCCTTCGACAGAGACGGCAATGGCTTCATCACGGCGGCTGAGCTGGCTGGCTCTATGGCGAAGATGGGCCACCCCTTGACCTACAAAGAGTTGGCTGAGATGATGAGGGAGGCTGATACTAATGGTGATGGTGTCATTAGTTTTAGTGAATTTGCTTCTATTATGGGTAGATCTGCTGCTGAGATTTTTGGTTTAAATACTAATCATCTTACTTCTTCTTCTTCTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_334497.p1 GENE.S_Transcript_334497~~S_Transcript_334497.p1 ORF type:5prime_partial len:195 (+),score=36.48,EF-hand_1|PF00036.28|0.00021,EF-hand_1|PF00036.28|0.00018,EF-hand_1|PF00036.28|8.1e-06,EF-hand_1|PF00036.28|1.5e-08,EF-hand_7|PF13499.2|1.4e-10,EF-hand_7|PF13499.2|5.8e-16,EF-hand_6|PF13405.2|8.4e-06,EF-hand_6|PF13405.2|0.0069,EF-hand_6|PF13405.2|1.5e-05,EF-hand_6|PF13405.2|1.1e+03,EF-hand_6|PF13405.2|0.0035,EF-hand_5|PF13202.2|0.00018,EF-hand_5|PF13202.2|0.017,EF-hand_5|PF13202.2|0.00044,EF-hand_5|PF13202.2|6.4e-06,EF-hand_8|PF13833.2|0.00034,EF-hand_8|PF13833.2|0.00013,EF-hand_8|PF13833.2|0.53,EF-hand_8|PF13833.2|1.1e-08,SPARC_Ca_bdg|PF10591.5|0.0044,SPARC_Ca_bdg|PF10591.5|0.3,EF-hand_9|PF14658.2|0.075,EF-hand_9|PF14658.2|0.45 S_Transcript_334497:2-586(+)
IEPPFPFPFPFLIKPLFIFIKKKNLMSTLKTEKLNQLRHIFNRFDMDSDGSITQLELAALLRSLGVKPTGDQIYALLTNMDSNGNGYIEFEELAEAMLPELENHDILINQEQLLEVFRSFDRDGNGFITAAELAGSMAKMGHPLTYKELAEMMREADTNGDGVISFSEFASIMGRSAAEIFGLNTNHLTSSSSS*

Click here to download the sequence:
Link to NCBI Protein BLAST